CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALTY (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhimurium GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALTI (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhi GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALSV (ATP-dependent Clp protease proteolytic subunit OS=Salmonella schwarzengrund (strain CVM19633) GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALPK (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A (strain AKU_12601) GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALPA (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALNS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella newport (strain SL254) GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALHS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella heidelberg (strain SL476) GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALEP (ATP-dependent Clp protease proteolytic subunit OS=Salmonella enteritidis PT4 (strain P125109) GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SALCH (ATP-dependent Clp protease proteolytic subunit OS=Salmonella choleraesuis GN=clpP PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DEHSC (ATP-dependent Clp protease proteolytic subunit OS=Dehalococcoides sp. (strain CBDB1) GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34 Identity = 74/178 (41.57%), Postives = 111/178 (62.36%), Query Frame = -1 Query: 231 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 764 D+++ L +ER+IF+G I+++ +N ++A +L+LD D K + +YI+ PGG ++ LA+YDTMQ ++ V T CVG A +A LL G KG R A+P + I + G A+GQA DI A E++R +D + L + TGQ EKI D R +Q+A+EYGLID I++ P K Sbjct: 23 DIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQTMEKIVHDSDRDYYLSAQQAVEYGLIDEILQKPENK 200 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |