CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBJ (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Kyoto / Type A2) GN=clpP PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34 Identity = 72/180 (40.00%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 249 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 788 GE S+ D+++ L ++R+I + + +++ ++ I+A +L+L++ D K +++YIN PGG +T +AIYDTMQ +K V T CVG A + FLLA G KG R A+P S + + P G RGQA DI A+ +L+++ + LS +TG+P E++ D R ++EA EYGLID +I Sbjct: 14 GERSY---DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=clpP PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34 Identity = 72/180 (40.00%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 249 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 788 GE S+ D+++ L ++R+I + + +++ ++ I+A +L+L++ D K +++YIN PGG +T +AIYDTMQ +K V T CVG A + FLLA G KG R A+P S + + P G RGQA DI A+ +L+++ + LS +TG+P E++ D R ++EA EYGLID +I Sbjct: 14 GERSY---DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CLOB1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=clpP PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34 Identity = 72/180 (40.00%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 249 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 788 GE S+ D+++ L ++R+I + + +++ ++ I+A +L+L++ D K +++YIN PGG +T +AIYDTMQ +K V T CVG A + FLLA G KG R A+P S + + P G RGQA DI A+ +L+++ + LS +TG+P E++ D R ++EA EYGLID +I Sbjct: 14 GERSY---DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_SALRD (ATP-dependent Clp protease proteolytic subunit 1 OS=Salinibacter ruber (strain DSM 13855) GN=clpP1 PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34 Identity = 73/189 (38.62%), Postives = 121/189 (64.02%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 PKV+ +T GE ++ D+++ L +ER++FIG I+++ +N +A +LYL+S S+ + +YIN PGG + L +YDTMQ +++P+ T CVG A + LLAGGE G R+ +P SR+ + P G GQA DI +A E+ ++ +++ LS TG+ ++I +D R ++EA EYGL+D+++ Sbjct: 23 PKVVEQTTRGERAY---DIFSRLLKERIVFIGTPINDQIANLTVAQLLYLESEGSSQPINIYINSPGGVIYSGLGVYDTMQYVEAPISTTCVGLAASMGSVLLAGGEDGQRACLPNSRVMMHQPMGGTEGQASDIEIQAKEMAWLKKRLYQILSFHTGKDIDQIEEDADRNHWLSAEEAQEYGLVDQVM 208
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_LEPIC (ATP-dependent Clp protease proteolytic subunit 1 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpP1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34 Identity = 78/193 (40.41%), Postives = 123/193 (63.73%), Query Frame = -1 Query: 237 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 812 P V+ +T GE S+ D+++ L ++R+IF+G I+++++N I A +L+L++ + + +Y+Y+N PGG V+ LAIYDTMQ +K V T C+G A +A LLAGG G RSA+P +RI + P G A GQA DI +A E+L++++ + + TG+ E+I KD R + EA YG+ID +I+ R Sbjct: 5 PYVIEQTSRGERSY---DIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYLYLNSPGGYVSSGLAIYDTMQYIKPDVRTLCLGQASSMAALLLAGGAAGKRSALPNARIMMHQPMGGATGQASDIEIQAREVLKLKEILNSIYHKHTGKTVEQIQKDTERNFYMTADEAKNYGIIDTVIQIDR 194
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SHISS (ATP-dependent Clp protease proteolytic subunit OS=Shigella sonnei (strain Ss046) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SHIFL (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SHIF8 (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri serotype 5b (strain 8401) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SHIDS (ATP-dependent Clp protease proteolytic subunit OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SHIBS (ATP-dependent Clp protease proteolytic subunit OS=Shigella boydii serotype 4 (strain Sb227) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |