CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 70/171 (40.94%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 252 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 764 D+++ L +ERVIF+ +++ +N I A +L+L++ + K +++YIN PGG VT +AIYDTMQ +K+ V T C+G A + FLLAGG KG R +P SR+ + P G +GQA DI A E+L +R+ + + L+ TGQ E I +D +R + A+EYG++D + Sbjct: 35 DIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIERDTNRDNFMSAPRAVEYGIVDAV 205
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PSEA6 (ATP-dependent Clp protease proteolytic subunit OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 73/199 (36.68%), Postives = 123/199 (61.81%), Query Frame = -1 Query: 225 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII--RPPRIKED 812 P V+ +T GE S+ D+++ L +E VIF+ +++ +N I+A ML+L++ + K +++YIN PGG VT +AIYDTM +K V T C+G A + FLL+GG KG R +P +R+ + P G +GQA D A E+L +++ + + ++ TGQ ++K+ +D R +QE+++YGL+D+++ RP D Sbjct: 14 PMVVEQTAKGERSY---DIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPDVSTVCIGQAASMGAFLLSGGAKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAAHTGQDYDKVARDTDRDNFLSAQESVDYGLVDQVLANRPDASNSD 209
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PORGI (ATP-dependent Clp protease proteolytic subunit OS=Porphyromonas gingivalis GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 74/177 (41.81%), Postives = 107/177 (60.45%), Query Frame = -1 Query: 237 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 767 +D+++ L +R+IF+G ID+ +N I A +LYLDS D K + +Y+N PGG V IYDTMQ + V T C G A +A LL G KG R A+P SR+ + P G +GQA D+ A E+LRV+ ++ +S +G+P E++ KD R + EALEYG+ID+I+ R Sbjct: 45 MDVFSRLMMDRIIFLGTQIDDYTANVIQAQLLYLDSADPGKDISIYLNSPGGSVYAGYGIYDTMQYIGCDVATICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQPLGGMQGQASDLEIAAREILRVKKELYTIISSHSGKPVEQVEKDSDRDYWMTAPEALEYGMIDKILEKNR 221
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECOUT (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain UTI89 / UPEC) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECOLI (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain K12) GN=clpP PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECOLC (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECOL6 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O6 GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECOL5 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECOK1 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O1:K1 / APEC GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECOHS (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O9:H4 (strain HS) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |