CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECO57 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O157:H7 GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ECO24 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L+V+ + + ++ TGQ E+I +D R + + EA+EYGL+D I+ Sbjct: 18 PMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DEIGD (ATP-dependent Clp protease proteolytic subunit OS=Deinococcus geothermalis (strain DSM 11300) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 79/195 (40.51%), Postives = 116/195 (59.49%), Query Frame = -1 Query: 228 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 812 P V+ +T G G + D+++ L ++R+IF+G I+ + +N I+A +L LDS + + + MYIN PGG+V LAIYDTM+ +K+PV T CVG A + LL G+KG R A+P SRI + + RG D+ +A E+LR+RD + R T P EK+ +D+ R EA +YGLID +I R E Sbjct: 5 PYVIEQT-GRGERMY-DIYSRLLKDRIIFVGTPIESQMANTIVAQLLLLDSQNPDQEIQMYINCPGGEVYAGLAIYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRLALPNSRIMIHQGSAGFRGNTPDLEVQAKEVLRLRDTLIDIYHRHTNLPHEKLLRDMERDYFMSPYEAQQYGLIDSVIEHTRQPE 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_BACFR (ATP-dependent Clp protease proteolytic subunit OS=Bacteroides fragilis GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 73/173 (42.20%), Postives = 107/173 (61.85%), Query Frame = -1 Query: 249 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 767 +D+++ L +R+IF+G ID+ +N + A +LYLDSVD K + +YIN PGG V L IYDTMQ + S V T C G A +A LL G KG RSA+P SR+ + P G A+GQA DI A E+ +++ ++ ++ +G F+K+ D R +QEA EYG+ID ++ Sbjct: 45 LDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISIYINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMASVLLVAGAKGKRSALPHSRVMIHQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSGTSFDKVWADSDRDYWMTAQEAKEYGMIDEVL 217
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_BACFN (ATP-dependent Clp protease proteolytic subunit OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 73/173 (42.20%), Postives = 107/173 (61.85%), Query Frame = -1 Query: 249 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 767 +D+++ L +R+IF+G ID+ +N + A +LYLDSVD K + +YIN PGG V L IYDTMQ + S V T C G A +A LL G KG RSA+P SR+ + P G A+GQA DI A E+ +++ ++ ++ +G F+K+ D R +QEA EYG+ID ++ Sbjct: 32 LDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISIYINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMASVLLVAGAKGKRSALPHSRVMIHQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSGTSFDKVWADSDRDYWMTAQEAKEYGMIDEVL 204
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_THEFY (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermobifida fusca (strain YX) GN=clpP2 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 72/167 (43.11%), Postives = 105/167 (62.87%), Query Frame = -1 Query: 249 LYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 749 L R+R++F+GQ +D+E +N+I+ +L L + D + + +YIN PGG VT +AIYD MQ + + V T +G A + LL G +G R A+P +RI + P+G G A DIR AD+LL V+ + +S TGQP E+I KD R + F +QEALEYG ID ++ Sbjct: 26 LLRQRIVFLGQQVDDEIANRIVGELLLLSAEDRERDITLYINSPGGSVTAGMAIYDVMQYIPNDVRTVGIGLAASMGQMLLCAGTRGKRYALPHTRIMMHQPSGGIGGTASDIRILADQLLYVKKMFLERISLHTGQPVEQIEKDADRDRWFTAQEALEYGFIDEVL 192
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DEIRA (ATP-dependent Clp protease proteolytic subunit OS=Deinococcus radiodurans GN=clpP PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34 Identity = 77/193 (39.90%), Postives = 119/193 (61.66%), Query Frame = -1 Query: 237 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 812 P V+ +T GE S+ D+++ L ++R+IF+G ++ + +N I+A +L LDS + + + MYIN PGG+V LAIYDTM+ +K+PV T CVG A + LL G+KG R A+P SRI + + RG D+ +A E+L++RD + + T P EK+ +D+ R +EAL+YGLID++I R Sbjct: 8 PYVIEQTGRGERSY---DIYSRLLKDRIIFVGTPVESQMANSIVAQLLLLDSQNPEQEIQMYINCPGGEVYAGLAIYDTMRYIKAPVSTICVGMAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFRGNTPDLEVQAKEVLKLRDTLVDIYHKHTDLPQEKLLRDMERDYFMSPEEALKYGLIDQVIDQTR 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_COREF (ATP-dependent Clp protease proteolytic subunit 2 OS=Corynebacterium efficiens GN=clpP2 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34 Identity = 70/181 (38.67%), Postives = 114/181 (62.98%), Query Frame = -1 Query: 249 PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 791 PG G+ D+++ L RER+IF+G +D+E +N++ A +L L + D ++ + +YIN PGG VT +AIYDTM+ + T+ +G A + FLL+GG G R A+P +RI + P+ G A DI +A++ + + + K ++ TGQ FE++TKD R + F +++A EYGL+D +I Sbjct: 10 PGAGTGYSGDIFDRLLRERIIFLGSQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTPGKRYALPHARIMMHQPSAGVGGTAADIAIQAEQFAQTKREMAKLIAEHTGQTFEQVTKDSDRDRWFTAEQAKEYGLVDHVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SULNB (ATP-dependent Clp protease proteolytic subunit OS=Sulfurovum sp. (strain NBC37-1) GN=clpP PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.605e-34 Identity = 68/180 (37.78%), Postives = 120/180 (66.67%), Query Frame = -1 Query: 249 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 788 GE S+ D+++ L ++R+I + ++++ ++ I+A +L+L++ D K +Y YIN PGG +T L+++DTM +K + T C+G A + FLLA G KG R A+P +RI + P+G A+GQ+ DI+ +A E+ R++D + + ++ KTG+ ++I KD R ++EA+EYGLID+++ Sbjct: 14 GERSY---DIYSRLLKDRIIMLSGEVNDQVASSIVAQLLFLEAQDPDKDIYFYINSPGGVITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARIMIHQPSGGAQGQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEAVEYGLIDKVL 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NITEU (ATP-dependent Clp protease proteolytic subunit OS=Nitrosomonas europaea GN=clpP PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.605e-34 Identity = 72/199 (36.18%), Postives = 120/199 (60.30%), Query Frame = -1 Query: 225 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 821 +G ++ T G G + D+++ L RER+IF+ + E +N ++A +L+L+S + K +++YIN PGG VT LA+YDT+Q +K V T CVG A + FLL G KG R +P SR+ + P G +GQA DI A E+L ++ + + +++ TGQ + I +D R G++ A++YGL+D ++ +K++ Sbjct: 17 LGLIPMVIETSGRGERAY-DIYSRLLRERIIFLVGPVTETSANLVIAQLLFLESENSEKDIFLYINSPGGLVTAGLAVYDTIQFIKPDVSTLCVGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILALKSRLNEIMAKHTGQTVKAIERDTDRDNFLGAEAAVKYGLVDAVLTSREVKQE 214 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |