CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_LACJO (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus johnsonii GN=clpP PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.605e-34 Identity = 76/189 (40.21%), Postives = 118/189 (62.43%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE ++ D+++ L ++R+I + I+++ +N I+A +L+LD+ D++K + +YIN PGG +T LAI DTM +KS V T +G A +A LL G KG R A+P S + + P G A+GQ DI+ A+E+L+ R + + L TGQP +KI KD R ++EA +YGLID I+ Sbjct: 4 PTVIEQTARGERAY---DIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPLGGAQGQQTDIQIAANEILKSRKKLNQILHETTGQPLDKILKDTERDNYLSAEEAKDYGLIDEIL 189
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_LACGA (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=clpP PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.605e-34 Identity = 76/189 (40.21%), Postives = 118/189 (62.43%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE ++ D+++ L ++R+I + I+++ +N I+A +L+LD+ D++K + +YIN PGG +T LAI DTM +KS V T +G A +A LL G KG R A+P S + + P G A+GQ DI+ A+E+L+ R + + L TGQP +KI KD R ++EA +YGLID I+ Sbjct: 4 PTVIEQTARGERAY---DIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPLGGAQGQQTDIQIAANEILKSRKKLNQILHETTGQPLDKILKDTERDNYLSAEEAKDYGLIDEIL 189
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_CHLPN (ATP-dependent Clp protease proteolytic subunit 2 OS=Chlamydia pneumoniae GN=clpP2 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.605e-34 Identity = 70/173 (40.46%), Postives = 112/173 (64.74%), Query Frame = -1 Query: 249 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 767 +D+++ L ++R++ IGQ I E +N ++A +L+L S D K + ++IN PGG +T LAIYDT++ L V T+C+G A + LL+ G KG R A+P SR+ + P+G G + DI+ +A E+L ++ ++ LS TGQP EKI +D R G++EA+ YGLID+++ Sbjct: 18 MDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKKDIQIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRHALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAEEAISYGLIDKVV 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PEDPA (ATP-dependent Clp protease proteolytic subunit OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=clpP PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.933e-34 Identity = 71/172 (41.28%), Postives = 109/172 (63.37%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+I + ID++ +N I++ +L+LD+ D K +Y+YIN PGG VT LAIYDTM +KS V T +G A +A L + G KG R A+P S + + P+G A+GQ +I A+++L+ R + L+ +GQP EKI D R +Q+A+EYGLID I+ Sbjct: 19 DIYSRLLKDRIIMLSGPIDDDLANSIISQLLFLDAQDSEKDIYLYINSPGGVVTAGLAIYDTMNFIKSDVQTIVMGMAASMASVLASSGTKGKRFALPHSEVMIHQPSGGAQGQQTEIEIAAEQILKTRKELNTILAENSGQPLEKINIDTERDNYLSAQDAVEYGLIDGIM 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NITOC (ATP-dependent Clp protease proteolytic subunit OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=clpP PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.933e-34 Identity = 72/173 (41.62%), Postives = 109/173 (63.01%), Query Frame = -1 Query: 246 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 764 D+++ L +ERV+F+ +++ +N ++A +L+L+S + K +++YIN PGG VT L+IYDTMQ +K V T CVG A + LLAGG G R +P SR+ + P G +GQA DI A E+L VR+ + L++ TGQP EKI D R + E+L YGL+D +++ Sbjct: 24 DIYSRLLKERVVFLVGPVEDHMANLVVAQLLFLESENPDKDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTLCVGQAASMGAVLLAGGAGGKRHCLPHSRLLIHQPLGGFQGQATDIDIHAREILLVRERLNHILAKHTGQPIEKIQHDTDRDYFMSATESLAYGLVDSVLK 196
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBB (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=clpP PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.933e-34 Identity = 75/189 (39.68%), Postives = 117/189 (61.90%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ER+I + ++++ SN I++ +L+L+S D K + +YIN PGG +T +AIYDTMQ +K V T CVG A + FLL+ G G R A+P + I + P G +GQA DI+ A+ +L++++ + K LS T QP E I D+ R + EA YGL+D++I Sbjct: 5 PMVVEQTSRGERSY---DIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDISIYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLSSGANGKRYALPNAEIMIHQPLGGFQGQATDIQIHANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEAKTYGLVDKVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_BUCAP (ATP-dependent Clp protease proteolytic subunit OS=Buchnera aphidicola subsp. Schizaphis graminum GN=clpP PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.933e-34 Identity = 74/180 (41.11%), Postives = 115/180 (63.89%), Query Frame = -1 Query: 249 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 788 GE S+ D+++ L +ER+IFI I++ ++ I+A ML+L++ K +++YIN PGG +T ++IYDTMQ +K V T C+G A +A FLL+ G KG RS +P +RI + P G +GQA DI A+E+ +++ + K +S TGQ +KI KD R + E+++YGLID I+ Sbjct: 18 GERSY---DIYSRLLKERIIFITGTIEDNMASSIVAQMLFLEAESLDKDIFLYINSPGGIITSGMSIYDTMQFIKPDVNTICIGQACSMAAFLLSSGTKGKRSCLPNARIMIHQPLGGYQGQASDIAIHAEEINKMKKKLNKLMSLNTGQSIKKINKDTERDCFLSAHESIKYGLIDLIL 194
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_RICRS (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia rickettsii (strain Sheila Smith) GN=clpP PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.297e-33 Identity = 71/172 (41.28%), Postives = 108/172 (62.79%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIYDTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI A E L+++ + + S+ T Q + I K + R +EA ++GL+D II Sbjct: 19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELQHIEKSMERDNFMSPEEAKKFGLVDNII 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_LACCB (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus casei (strain BL23) GN=clpP PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.297e-33 Identity = 71/172 (41.28%), Postives = 110/172 (63.95%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+I + ++++ +N ++A +L+LD+ D K +Y+YIN PGG +T LA+ DTM +KS V T +G A +A LLAGG KG R A+P S I + P+G A+GQ +I A+E+L+ R + + L+ TGQ E+I KD R +QEA +YGLID I+ Sbjct: 18 DIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVITSGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQQTEIEIAAEEILKTRRKMNQILADATGQTIEQIKKDTERDHYMSAQEAKDYGLIDDIL 189
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_LACC3 (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus casei (strain ATCC 334) GN=clpP PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.297e-33 Identity = 71/172 (41.28%), Postives = 110/172 (63.95%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+I + ++++ +N ++A +L+LD+ D K +Y+YIN PGG +T LA+ DTM +KS V T +G A +A LLAGG KG R A+P S I + P+G A+GQ +I A+E+L+ R + + L+ TGQ E+I KD R +QEA +YGLID I+ Sbjct: 18 DIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVITSGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQQTEIEIAAEEILKTRRKMNQILADATGQTIEQIKKDTERDHYMSAQEAKDYGLIDDIL 189 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |