CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CRUWA (ATP-dependent Clp protease proteolytic subunit OS=Crucihimalaya wallichii GN=clpP PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.441e-40 Identity = 81/193 (41.97%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_BARVE (ATP-dependent Clp protease proteolytic subunit OS=Barbarea verna GN=clpP PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.441e-40 Identity = 81/193 (41.97%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SOLTU (ATP-dependent Clp protease proteolytic subunit OS=Solanum tuberosum GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40 Identity = 78/191 (40.84%), Postives = 122/191 (63.87%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKVL+R PG+ WVD++N LYRER++F+GQ I + SNQ++ M+YL D++K +Y+++N PGG V P +AIYDTMQ ++ + T C+G A + F+LAGG+ R A P +R+ + P A Q + EA EL+++R+ + + + +TG+PF + +D+ R + EA YG++D Sbjct: 1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDENKELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPHARVMIHEPYSAFYMAQVGEFVMEAVELMKLRETLTRVYAERTGKPFWVVHEDMERDIFMSATEAQAYGIVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SOLBU (ATP-dependent Clp protease proteolytic subunit OS=Solanum bulbocastanum GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40 Identity = 78/191 (40.84%), Postives = 122/191 (63.87%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKVL+R PG+ WVD++N LYRER++F+GQ I + SNQ++ M+YL D++K +Y+++N PGG V P +AIYDTMQ ++ + T C+G A + F+LAGG+ R A P +R+ + P A Q + EA EL+++R+ + + + +TG+PF + +D+ R + EA YG++D Sbjct: 1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDENKELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPHARVMIHEPYSAFYMAQVGEFVMEAVELMKLRETLTRVYAERTGKPFWVVHEDMERDIFMSATEAQAYGIVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ILLOL (ATP-dependent Clp protease proteolytic subunit OS=Illicium oligandrum GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40 Identity = 82/193 (42.49%), Postives = 123/193 (63.73%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD++ +Y++IN PGG V P +AIYDTMQ + V T C+G A + FLLAGGE R A P +R+ + PA + Q + EA+ELL++R+ I + +++TG P + +D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRNPGEEGAVWVDVYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFLLAGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYAQRTGNPLWVVFEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_AETGR (ATP-dependent Clp protease proteolytic subunit OS=Aethionema grandiflora GN=clpP PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40 Identity = 80/193 (41.45%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D + SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_AETCO (ATP-dependent Clp protease proteolytic subunit OS=Aethionema cordifolium GN=clpP PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40 Identity = 80/193 (41.45%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D + SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP7 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=clpP PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40 Identity = 83/202 (41.09%), Postives = 131/202 (64.85%), Query Frame = -1 Query: 231 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 836 +A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++ D K +Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R + EA+EYGLID+++ IK Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVLTHRDIK 196
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_PROM9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40 Identity = 83/184 (45.11%), Postives = 120/184 (65.22%), Query Frame = -1 Query: 231 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 782 GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + ELS +TG+ +E I +D R EA+EYGLID ++ +K Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDYETIKEDTDRDFYMSPSEAVEYGLIDLVLDKKPVK 194
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=clpP PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.102e-40 Identity = 79/193 (40.93%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE S W+D++N LYRER++F+GQ+ID E SNQ++ M+YL + + K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P +R+ + P A Q + EA+ELL++R+ + + +++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRTGKPLWVVSEDMERDVFMSAAEAQVHGIVDLV 193 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |