CN186342

Overview
NameCN186342
Unique NameCN186342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1514 contig Csv1_Contig1514:187..1090. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: KCIP4_MACFA (Kv channel-interacting protein 4 OS=Macaca fascicularis GN=KCNIP4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 45/177 (25.42%), Postives = 92/177 (51.98%), Query Frame = -3
Query:  267 EILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGM----NLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 779
            E+L  ++ F+  E++ LY  FK    +    G++N+E F+   + F      + +A  +F+ FDT HNG + FE+F + LS+      + +K+ ++F LYD+ + G+I ++E+  ++ A     G      L +D     ++  F++ D   DG +  +E+     +  +++++M L
Sbjct:   74 ELLEAQSKFTKKELQILYRGFKNECPS----GVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQL 245          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: KCIP4_HUMAN (Kv channel-interacting protein 4 OS=Homo sapiens GN=KCNIP4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 45/177 (25.42%), Postives = 92/177 (51.98%), Query Frame = -3
Query:  267 EILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGM----NLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 779
            E+L  ++ F+  E++ LY  FK    +    G++N+E F+   + F      + +A  +F+ FDT HNG + FE+F + LS+      + +K+ ++F LYD+ + G+I ++E+  ++ A     G      L +D     ++  F++ D   DG +  +E+     +  +++++M L
Sbjct:   74 ELLEAQSKFTKKELQILYRGFKNECPS----GVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQL 245          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: HPCL1_XENTR (Hippocalcin-like protein 1 OS=Xenopus tropicalis GN=hpcal1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 58/177 (32.77%), Postives = 90/177 (50.85%), Query Frame = -3
Query:  279 PEILA---RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+L      T F+  E++  Y+ F K        G +  EEF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K++++F +YDL   G+I R E+ ++V A   +  S M + +D    E   DK F++ DT +DGK+  EE+       PS+++
Sbjct:   10 PEVLQDLRENTEFTDHELQEWYKGFLKDCPT----GHLTVEEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFKQMDTNNDGKLSLEEFIKGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = -3
Query:  303 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLV 755
            F   EI  L + F+K+   + + G ++ +EF   +     +++    RV D+FD   NG + F+EF + +S F        K+ F+F++YD+   G+I   E+ Q++   +   G NL D  ++ I+DKT   AD   DGKI  +E+ S+V
Sbjct:   15 FDADEIRRLGKRFRKLD--LDNSGALSIDEF---MSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: HPCL1_TAEGU (Hippocalcin-like protein 1 OS=Taeniopygia guttata GN=HPCAL1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 58/177 (32.77%), Postives = 89/177 (50.28%), Query Frame = -3
Query:  279 PEILA---RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+L      T F+  E++  Y+ F K        G +  EEF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K++++F +YDL   G+I R E+ ++V A   +  S M + +D    E   DK F + DT +DGK+  EE+       PS+++
Sbjct:   10 PEVLQDLRENTEFTDHELQEWYKGFLKDCPT----GHLTVEEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: HPCL1_RAT (Hippocalcin-like protein 1 OS=Rattus norvegicus GN=Hpcal1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 57/177 (32.20%), Postives = 89/177 (50.28%), Query Frame = -3
Query:  279 PEILA---RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+L      T F+  E++  Y+ F K        G +  +EF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K++++F +YDL   G+I R E+ ++V A   +  S M + +D    E   DK F + DT +DGK+  EE+       PS+++
Sbjct:   10 PEVLQDLREHTEFTDHELQEWYKGFLKDCPT----GHLTVDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: HPCL1_MOUSE (Hippocalcin-like protein 1 OS=Mus musculus GN=Hpcal1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 57/177 (32.20%), Postives = 89/177 (50.28%), Query Frame = -3
Query:  279 PEILA---RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+L      T F+  E++  Y+ F K        G +  +EF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K++++F +YDL   G+I R E+ ++V A   +  S M + +D    E   DK F + DT +DGK+  EE+       PS+++
Sbjct:   10 PEVLQDLREHTEFTDHELQEWYKGFLKDCPT----GHLTVDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: HPCL1_CHICK (Hippocalcin-like protein 1 OS=Gallus gallus GN=HPCAL1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 58/177 (32.77%), Postives = 89/177 (50.28%), Query Frame = -3
Query:  279 PEILA---RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+L      T F+  E++  Y+ F K        G +  EEF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K++++F +YDL   G+I R E+ ++V A   +  S M + +D    E   DK F + DT +DGK+  EE+       PS+++
Sbjct:   10 PEVLQDLRENTEFTDHELQEWYKGFLKDCPT----GHLTVEEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCS1_CAEEL (Neuronal calcium sensor 1 OS=Caenorhabditis elegans GN=ncs-1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12
Identity = 52/175 (29.71%), Postives = 89/175 (50.86%), Query Frame = -3
Query:  267 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNL----SDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 773
            LA +T F+  EI+  Y+ F +       +G++ +  FQ     F      S FA  VF +FD   +G + F EF RALS+      +D+K+ ++F+LYDL Q GFI R E+  +V +     G ++     ++  E  +D+ F   D  +D ++  EE++      PS++  ++L
Sbjct:   16 LAEQTYFTEKEIKQWYKGFVRDCP----NGMLTEAGFQKIYKQFFPQGDPSDFASFVFKVFDENKDGAIEFHEFIRALSITS-RGNLDEKLHWAFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPEEENTPEKRVDRIFRMMDKNNDAQLTLEEFKEGAKADPSIVHALSL 185          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: KCIP2_RAT (Kv channel-interacting protein 2 OS=Rattus norvegicus GN=Kcnip2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12
Identity = 50/180 (27.78%), Postives = 91/180 (50.56%), Query Frame = -3
Query:  267 EDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGM----NLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 788
            E  E L  +T F+  E++ LY  FK    +    G++N+E F+   + F      S +A  +F+ FDT H+G + FE+F   LSV      IDD++ ++F LYDL + G I ++E+  ++ +     G      L ++     ++  F++ D   DG +  EE+     +  +++++M L
Sbjct:   91 EGLEQLQEQTKFTRRELQVLYRGFKNECPS----GIVNEENFKQIYSQFFPQGDSSNYATFLFNAFDTNHDGSVSFEDFVAGLSVI-LRGTIDDRLSWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQQDENIMRSMQL 265          
The following BLAST results are available for this feature:
BLAST of CN186342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
KCIP4_MACFA6.133e-1325.42Kv channel-interacting protein 4 OS=Macaca fascicu... [more]
KCIP4_HUMAN6.133e-1325.42Kv channel-interacting protein 4 OS=Homo sapiens G... [more]
HPCL1_XENTR6.133e-1332.77Hippocalcin-like protein 1 OS=Xenopus tropicalis G... [more]
CANB1_DROME6.133e-1331.13Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
HPCL1_TAEGU8.010e-1332.77Hippocalcin-like protein 1 OS=Taeniopygia guttata ... [more]
HPCL1_RAT8.010e-1332.20Hippocalcin-like protein 1 OS=Rattus norvegicus GN... [more]
HPCL1_MOUSE8.010e-1332.20Hippocalcin-like protein 1 OS=Mus musculus GN=Hpca... [more]
HPCL1_CHICK8.010e-1332.77Hippocalcin-like protein 1 OS=Gallus gallus GN=HPC... [more]
NCS1_CAEEL1.046e-1229.71Neuronal calcium sensor 1 OS=Caenorhabditis elegan... [more]
KCIP2_RAT1.046e-1227.78Kv channel-interacting protein 2 OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186342 ID=CN186342; Name=CN186342; organism=Citrus sinensis; type=EST; length=904bp
TTTTTAGCGGGTAGAACCATAATTTTTATACTAAATACACAAAAACAAAC
ATCCTCAAAAAAGAAACCAATACCAATACGATGCAGAAGCAACACTCTCC
CATGCCCTTCACAATCATGCACGAGAGAGCCATGTTGTCTATAAATAAAC
AAAACATAAAAATAACAATCTCTCTTGAGCTCTAACCGTTCCCTAGTTTA
GGTATCTTCAACTCTTGAATGGAACACAAAGCTCGGGAACGTTGTTGTGA
TGTCCTTGAGGTACTGGAGGGTCATATTCTTCAAAAGTGATGGATGACGC
AAAACAAGGCTTCTCCACTCTTCCTTGTCGATCTTCCCATCATGTTTTGT
ATCAGCTTCTTCAAAGGTCTTATCAATTATAGTTTCTATAACATCATCCG
AAAGATTCATGCCAGATTCTGCAAGTGTAGCTACCACCATTTGCTTCACC
TCCTGCCTCTCAATAAAACCTTGCTGCTTGAGATCATATAGTTGAAAAGA
GAACTCAATTTTATCATCAATTGGGGCATTTGGATGGAAAACAGAAAGAG
CACGAGCAAACTCTTCAAACCCTAGTATTCCATTGTGCTTTGTATCAAAT
AAGTCAAAAACCCGATCAGCAAACAAGCTCTCTTTTTTGTTTGTCTTGAA
TAATGCTAACTGGAACTCTTCCTTGTTAATTAGACCGTCATCAATCACAG
CACTGCTAATCTTCTTAAAGAGCTCATACAGTGCCTCGATTTCACTTACA
CTAAAAACTGTCTCTCTCGCAAGTATTTCAGGATCTTCGAGGCCCCTAGA
CGGATTTGTATCACAACACTGCAATAGGGAAGCAAATAAATGCTTAAATC
CCTCTATGCACTGCAACATGATAGTCTCTGCACATCAAAACACTCCATAC
CTTT
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