CN186342

Overview
NameCN186342
Unique NameCN186342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCLDA_DANRE (Neurocalcin-delta A OS=Danio rerio GN=ncalda PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = -3
Query:  279 PEI---LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+   L   T F+  EI+  Y+ F +   +    G ++ EEF+     F      S FA+ VF  FD   +G + F EF  ALSV      ++ K++++F +YDL   G+I + E+ ++V A   +  S M + +D    E   +K F + DT  DGK+  EE+       PS+++
Sbjct:   10 PEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GNLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIKGAKTDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: HPCL4_MOUSE (Hippocalcin-like protein 4 OS=Mus musculus GN=Hpcal4 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 53/174 (30.46%), Postives = 83/174 (47.70%), Query Frame = -3
Query:  282 EILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMV------VATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLL 779
            E L + T FS  E++  Y+ F K   +    G++N EEFQ    K       S FA   F  FD   +G + F EF  ALSV    +  + K+ ++F++YDL   G I R E+ +++      V T+    MN      +  +DK F++ D   D +I  EE++      PS++
Sbjct:   14 EDLVQNTEFSEQELKQWYKGFLKDCPS----GILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGS-FEQKLNWAFEMYDLDGDGRITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPSIV 182          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCLDB_DANRE (Neurocalcin-delta B OS=Danio rerio GN=ncaldb PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 55/177 (31.07%), Postives = 87/177 (49.15%), Query Frame = -3
Query:  279 PEI---LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+   L   T F+  EI   Y+ F +   +    G ++ +EF+     F      S FA+ VF  FD   +G + F EF  ALSV      +D K++++F +YDL   G+I + E+ ++V A   +  S M + +D    E   DK F + DT  DGK+  EE+       PS+++
Sbjct:   10 PEVIQDLLDNTDFTEHEILEWYKGFLRDCPS----GALSMDEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGRLDQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNRDGKLSLEEFVEGAKNDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCALD_TAEGU (Neurocalcin-delta OS=Taeniopygia guttata GN=NCALD PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = -3
Query:  279 PEI---LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+   L   T F+  EI+  Y+ F +   +    G ++ EEF+     F      S FA+ VF  FD   +G + F EF  ALSV      ++ K++++F +YDL   G+I + E+ ++V A   +  S M + +D    E   +K F + DT  DGK+  EE+       PS+++
Sbjct:   10 PEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCALD_CHICK (Neurocalcin-delta OS=Gallus gallus GN=NCALD PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = -3
Query:  279 PEI---LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+   L   T F+  EI+  Y+ F +   +    G ++ EEF+     F      S FA+ VF  FD   +G + F EF  ALSV      ++ K++++F +YDL   G+I + E+ ++V A   +  S M + +D    E   +K F + DT  DGK+  EE+       PS+++
Sbjct:   10 PEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: CHP1_RAT (Calcium-binding protein p22 OS=Rattus norvegicus GN=Chp PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 56/196 (28.57%), Postives = 98/196 (50.00%), Query Frame = -3
Query:  258 EDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ----LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP----------NAPI-----DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYL 788
            E+ E + +ET FS S+I  LY  F  +     ++G +++E+FQ    LA+       +   DR+ + F ++    + F  F R L+ F P          N P       +K+ F+F+LYDL +   I R E+ Q++   +   G+N+SD+ + +I D+T +EAD   D  I   E+   VL    + + M++++L
Sbjct:   12 EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK-VLEKVDVEQKMSIRFL 194          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: CHP1_MOUSE (Calcium-binding protein p22 OS=Mus musculus GN=Chp PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 56/196 (28.57%), Postives = 98/196 (50.00%), Query Frame = -3
Query:  258 EDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ----LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP----------NAPI-----DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYL 788
            E+ E + +ET FS S+I  LY  F  +     ++G +++E+FQ    LA+       +   DR+ + F ++    + F  F R L+ F P          N P       +K+ F+F+LYDL +   I R E+ Q++   +   G+N+SD+ + +I D+T +EAD   D  I   E+   VL    + + M++++L
Sbjct:   12 EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK-VLEKVDVEQKMSIRFL 194          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCALD_RAT (Neurocalcin-delta OS=Rattus norvegicus GN=Ncald PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = -3
Query:  279 PEI---LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+   L   T F+  EI+  Y+ F +   +    G ++ EEF+     F      S FA+ VF  FD   +G + F EF  ALSV      ++ K++++F +YDL   G+I + E+ ++V A   +  S M + +D    E   +K F + DT  DGK+  EE+       PS+++
Sbjct:   10 PEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCALD_MOUSE (Neurocalcin-delta OS=Mus musculus GN=Ncald PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = -3
Query:  279 PEI---LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+   L   T F+  EI+  Y+ F +   +    G ++ EEF+     F      S FA+ VF  FD   +G + F EF  ALSV      ++ K++++F +YDL   G+I + E+ ++V A   +  S M + +D    E   +K F + DT  DGK+  EE+       PS+++
Sbjct:   10 PEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181          
BLAST of CN186342 vs. ExPASy Swiss-Prot
Match: NCALD_MACFA (Neurocalcin-delta OS=Macaca fascicularis GN=NCALD PE=2 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = -3
Query:  279 PEI---LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 782
            PE+   L   T F+  EI+  Y+ F +   +    G ++ EEF+     F      S FA+ VF  FD   +G + F EF  ALSV      ++ K++++F +YDL   G+I + E+ ++V A   +  S M + +D    E   +K F + DT  DGK+  EE+       PS+++
Sbjct:   10 PEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181          
The following BLAST results are available for this feature:
BLAST of CN186342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
NCLDA_DANRE2.577e-1130.51Neurocalcin-delta A OS=Danio rerio GN=ncalda PE=2 ... [more]
HPCL4_MOUSE2.577e-1130.46Hippocalcin-like protein 4 OS=Mus musculus GN=Hpca... [more]
NCLDB_DANRE3.365e-1131.07Neurocalcin-delta B OS=Danio rerio GN=ncaldb PE=2 ... [more]
NCALD_TAEGU3.365e-1130.51Neurocalcin-delta OS=Taeniopygia guttata GN=NCALD ... [more]
NCALD_CHICK3.365e-1130.51Neurocalcin-delta OS=Gallus gallus GN=NCALD PE=2 S... [more]
CHP1_RAT3.365e-1128.57Calcium-binding protein p22 OS=Rattus norvegicus G... [more]
CHP1_MOUSE3.365e-1128.57Calcium-binding protein p22 OS=Mus musculus GN=Chp... [more]
NCALD_RAT4.395e-1130.51Neurocalcin-delta OS=Rattus norvegicus GN=Ncald PE... [more]
NCALD_MOUSE4.395e-1130.51Neurocalcin-delta OS=Mus musculus GN=Ncald PE=1 SV... [more]
NCALD_MACFA4.395e-1130.51Neurocalcin-delta OS=Macaca fascicularis GN=NCALD ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186342 ID=CN186342; Name=CN186342; organism=Citrus sinensis; type=EST; length=904bp
TTTTTAGCGGGTAGAACCATAATTTTTATACTAAATACACAAAAACAAAC
ATCCTCAAAAAAGAAACCAATACCAATACGATGCAGAAGCAACACTCTCC
CATGCCCTTCACAATCATGCACGAGAGAGCCATGTTGTCTATAAATAAAC
AAAACATAAAAATAACAATCTCTCTTGAGCTCTAACCGTTCCCTAGTTTA
GGTATCTTCAACTCTTGAATGGAACACAAAGCTCGGGAACGTTGTTGTGA
TGTCCTTGAGGTACTGGAGGGTCATATTCTTCAAAAGTGATGGATGACGC
AAAACAAGGCTTCTCCACTCTTCCTTGTCGATCTTCCCATCATGTTTTGT
ATCAGCTTCTTCAAAGGTCTTATCAATTATAGTTTCTATAACATCATCCG
AAAGATTCATGCCAGATTCTGCAAGTGTAGCTACCACCATTTGCTTCACC
TCCTGCCTCTCAATAAAACCTTGCTGCTTGAGATCATATAGTTGAAAAGA
GAACTCAATTTTATCATCAATTGGGGCATTTGGATGGAAAACAGAAAGAG
CACGAGCAAACTCTTCAAACCCTAGTATTCCATTGTGCTTTGTATCAAAT
AAGTCAAAAACCCGATCAGCAAACAAGCTCTCTTTTTTGTTTGTCTTGAA
TAATGCTAACTGGAACTCTTCCTTGTTAATTAGACCGTCATCAATCACAG
CACTGCTAATCTTCTTAAAGAGCTCATACAGTGCCTCGATTTCACTTACA
CTAAAAACTGTCTCTCTCGCAAGTATTTCAGGATCTTCGAGGCCCCTAGA
CGGATTTGTATCACAACACTGCAATAGGGAAGCAAATAAATGCTTAAATC
CCTCTATGCACTGCAACATGATAGTCTCTGCACATCAAAACACTCCATAC
CTTT
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