CN186341

Overview
NameCN186341
Unique NameCN186341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = -3
Query:  304 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLV 762
            T FS  EI+ L + F K+ +     G++   EF   L       +  A R+ D+FD  H+G + F+EF   LS F       +K+ F+F++YD+ + G+I   E   + +      G NL D  ++ I+DKT  EAD   DGKI  EE+ + V
Sbjct:   15 TNFSSDEIDRLRKRFMKLDTDA--SGILETNEF---LSLPGVAANPLASRLMDVFDENHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGE---LFIVLKMMVGNNLKDAQLQQIVDKTIMEADKDGDGKISFEEFEAQV 159          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: CANB1_RAT (Calcineurin subunit B type 1 OS=Rattus norvegicus GN=Ppp3r1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 49/151 (32.45%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  304 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLV 756
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT   AD   DG+I  EE+ ++V
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: CANB1_MOUSE (Calcineurin subunit B type 1 OS=Mus musculus GN=Ppp3r1 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 49/151 (32.45%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  304 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLV 756
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT   AD   DG+I  EE+ ++V
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: CANB1_HUMAN (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 49/151 (32.45%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  304 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLV 756
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT   AD   DG+I  EE+ ++V
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: CANB1_BOVIN (Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 49/151 (32.45%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  304 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLV 756
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT   AD   DG+I  EE+ ++V
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: FREQ_DROME (Frequenin-1 OS=Drosophila melanogaster GN=Frq1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 53/175 (30.29%), Postives = 96/175 (54.86%), Query Frame = -3
Query:  268 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT---NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA---TLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 774
            L  +T F+  EI   ++ F K       +GL+ ++ F + ++K        S FA  VF +FD  ++G + FEEF RALSV      +D+K++++F+LYD+   G+I R+E+  +V A    + +   +  ++  +  +DK F++ D  HDGK+  EE+R      P +++ ++L
Sbjct:   16 LTTDTYFTEKEIRQWHKGFLKDCP----NGLLTEQGF-IKIYKQFFPQGDPSKFASLVFRVFDENNDGSIEFEEFIRALSV-TSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14
Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = -3
Query:  268 FSVSEIEALYELFKKISSAVIDDGLINKEEF-QLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 756
            F   E++ L + F K+     + G I +EEF  L    TN      A R+  +FD    G + F+EF   LS F      + K+ F+F++YD+ + G+I   E   + +      G NL D  ++ I+DKT  EAD   DGKI  EE+  +V  +  +  +MTL
Sbjct:   18 FDREEVDRLRKRFMKLDKD--NSGTIEREEFLSLPQISTNP----LATRMIAIFDEDGGGDVDFQEFVSGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGE---LFIVLKMMVGSNLKDQQLQQIVDKTIMEADLDKDGKISFEEFTKMV-ENTDVSMSMTL 171          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: HPCA_RAT (Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus GN=Hpca PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = -3
Query:  280 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 774
            L   T FS  E++  Y+ F K        G++N +EF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K+ ++F +YDL   G+I R+E+ ++V A   +  S M + +D    E   +K F + DT +DGK+  EE+       PS+++
Sbjct:   16 LRENTEFSELELQEWYKGFLKDCPT----GILNVDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSV-TSRGRLEQKLMWAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIVR 181          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: HPCA_PIG (Neuron-specific calcium-binding protein hippocalcin OS=Sus scrofa GN=HPCA PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = -3
Query:  280 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 774
            L   T FS  E++  Y+ F K        G++N +EF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K+ ++F +YDL   G+I R+E+ ++V A   +  S M + +D    E   +K F + DT +DGK+  EE+       PS+++
Sbjct:   16 LRENTEFSELELQEWYKGFLKDCPT----GILNVDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSV-TSRGRLEQKLMWAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIVR 181          
BLAST of CN186341 vs. ExPASy Swiss-Prot
Match: HPCA_MOUSE (Neuron-specific calcium-binding protein hippocalcin OS=Mus musculus GN=Hpca PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = -3
Query:  280 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--TLAESGMNLSDD--VIETIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 774
            L   T FS  E++  Y+ F K        G++N +EF+   A F      S FA+ VF  FDT  +G + F EF  ALSV      ++ K+ ++F +YDL   G+I R+E+ ++V A   +  S M + +D    E   +K F + DT +DGK+  EE+       PS+++
Sbjct:   16 LRENTEFSELELQEWYKGFLKDCPT----GILNVDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSV-TSRGRLEQKLMWAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIVR 181          
The following BLAST results are available for this feature:
BLAST of CN186341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
CANB_YARLI3.800e-1533.33Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]
CANB1_RAT6.482e-1532.45Calcineurin subunit B type 1 OS=Rattus norvegicus ... [more]
CANB1_MOUSE6.482e-1532.45Calcineurin subunit B type 1 OS=Mus musculus GN=Pp... [more]
CANB1_HUMAN6.482e-1532.45Calcineurin subunit B type 1 OS=Homo sapiens GN=PP... [more]
CANB1_BOVIN6.482e-1532.45Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3... [more]
FREQ_DROME1.444e-1430.29Frequenin-1 OS=Drosophila melanogaster GN=Frq1 PE=... [more]
CANB_NEUCR3.217e-1432.32Calcineurin subunit B OS=Neurospora crassa GN=cnb-... [more]
HPCA_RAT1.596e-1332.75Neuron-specific calcium-binding protein hippocalci... [more]
HPCA_PIG1.596e-1332.75Neuron-specific calcium-binding protein hippocalci... [more]
HPCA_MOUSE1.596e-1332.75Neuron-specific calcium-binding protein hippocalci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186341 ID=CN186341; Name=CN186341; organism=Citrus sinensis; type=EST; length=896bp
TTTTTTAGCGGGTAGAACCATAATTTTTAAACTAAATACACAAAAACAAA
CATCCTCAAAAAAGAAACCAATACCAATACGATGCAGAAGCAACACTCTC
CCATGCCCTTCACAATCATGCACGAGAGAGCCATGTTGTCTATAAATAAA
CAAAACATAAAAATAACAATCTCTCTTGAGCTCTAACCGTTCCCTAGTTT
AGGTATCTTCAACTCTTGAATGGAACACAAAGCTCGGGAACGTTGTTGTG
ATGTCCTTGAGGTACTGGAGGGTCATATTCTTCAAAAGTGATGGATGACG
CAAAACAAGGCTTCTCCACTCTTCCTTGTCGATCTTCCCATCATGTTTTG
TATCAGCTTCTTCAAAGGTCTTATCAATTATAGTTTCTATAACATCATCC
GAAAGATTCATGCCAGATTCTGCAAGTGTAGCTACCACCATTTGCTTCAC
CTCCTGCCTCTCAATAAAACCTTGCTGCTTGAGATCATATAGTTGAAAAG
AGAACTCAATTTTATCATCAATTGGGGCATTTGGATGGAAAACAGAAAGA
GCACGAGCAAACTCTTCAAACCCTAGTATTCCATTGTGCTTTGTATCAAA
TAAGTCAAAAACCCGATCAGCAAACAAGCTCTCTTTTTTGTTTGTCTTGA
ATAATGCTAACTGGAACTCTTCCTTGTTAATTAGACCGTCATCAATCACA
GCACTGCTAATCTTCTTAAAGAGCTCATACAGTGCCTCGATTTCACTTAC
ACTAAAAACTGTCTCTCTCGCAAGTATTTCAGGATCTTCGAGGCCCCTAG
ACGGATTTGTATCACAACACTGCAATAGGGAAGCAAATAAATGCCTTAAT
CCCTCTATGCACTGCAACATGATAGTCTCTGCACATCAAAACACTC
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