CN186320

Overview
NameCN186320
Unique NameCN186320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20
Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            IFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  277 IFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            IFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  277 IFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGT-ENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            +FTG CGT LDHGV  VGYG  E+G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASY
Sbjct:  286 VFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASY 351          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19
Identity = 45/67 (67.16%), Postives = 49/67 (73.13%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            +FTG CGT LDHGV  VGYGT  +G  YW VKNSWG  WGE GYIRMER ++    G CGIAMEASY
Sbjct:  275 VFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDK-EGLCGIAMEASY 340          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.028e-19
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGT-ENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            +FTG CGT LDHGV  VGYG  E+G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASY
Sbjct:  286 VFTGDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASY 351          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.746e-19
Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            + TG CG SLDHGV  VGYG+ +G DYWI++NSWG +WG+ GY++++RN+     GKCGIAM  SY
Sbjct:  282 VMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPF-GKCGIAMMPSY 346          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.811e-19
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            IFTG C  S +H +T VGYGTEN  D+WIVKNSWG +WGE GYIR ERN+     GKCGI   ASY
Sbjct:  150 IFTGSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENP-DGKCGITRFASY 214          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            IFTG CGT+ +HGV  VGYGT++G +YWIV+NSWG +WG  GYI MERNVA +  G CGIA   SY
Sbjct:  147 IFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASS-AGLCGIAQLPSY 211          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            +F G+CGT LDHGV AVGYG+  G+DY IVKNSWG  WGE G+IRM+RN  G   G CGI   ASY
Sbjct:  286 VFNGKCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRN-TGKPEGLCGINKMASY 350          
BLAST of CN186320 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = -3
Query:  525 IFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 722
            +FTG C T L+HGV  VGYGT  +G +YWIV+NSWG  WGE GYIRM+RN++    G CGIAM ASY
Sbjct:  277 VFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNIS-KKEGLCGIAMMASY 342          
The following BLAST results are available for this feature:
BLAST of CN186320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
ACTN_ACTDE7.969e-2066.67Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH1.041e-1966.67Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CYSP2_HORVU1.775e-1967.16Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSEP_RICCO2.319e-1967.16Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP1_HORVU3.028e-1967.16Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CPR1_ARATH6.746e-1957.58Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CPGP2_ZINOF8.811e-1963.64Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
ERVB_TABDI1.503e-1863.64Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
XCP1_ARATH5.711e-1863.64Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSEP_VIGMU7.459e-1862.69Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002L13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186320 ID=CN186320; Name=CN186320; organism=Citrus sinensis; type=EST; length=724bp
TTTTTTACAAAACCAACGTCCGAATAAATATTTAACAGACCATCCACCTG
CCGGTACATTAACGTTTGAAATGAAATGCAGTAAAATGAACTAAGGCCGG
GGAGAAACTCATTCACAAGCACGAATATCTTCATCCTCCCTTCGGCCTTC
CACTGCTCTTACAGTGCCAACTATAATTAAGCACTGCTACTTCCACCTTG
ATTTCCATGAGCCCAGTAAGGTTTAGCAGGGGTGCGTCGCAATGCCCTCA
CTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCCCAGCACGAACATTA
CAGATGGGATAGTCATGTGGGCAGCAGCTATAGTGGTCATCACAGCAGGT
GGCAGCCTCAAGCGGGCAGCATCCCCATGCAAAGCAAGAGTTACCATACT
CAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAGAGTAATAATTGTCA
CACACAGCAGGAGGCTTTGTTGGAGATGGAGGAGACGGTCCGGGGTTGGG
AGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTCCATGGCAATTCCAC
ACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCATCCTAATATAGCCA
CCCTCTCCCCAGCTACTGCCCCATGAATTCTTCACAATCCAGTAATCAGC
TCCATTTTCTGTGCCATATCCAACAGCAGTAACACCATGGTCCAGAGATG
TCCCACATCTTCCCGTAAATATAC
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