CN186311

Overview
NameCN186311
Unique NameCN186311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:204..966. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = -3
Query:  269 FLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 760
            +L++ PFG++PVL  GD K+FESRAI +YIA+++  +G  L   GK I     +  W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:   44 YLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLL--GKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.598e-29
Identity = 71/168 (42.26%), Postives = 101/168 (60.12%), Query Frame = -3
Query:  263 LSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 757
            L  NPFGQ+P  + GD  LFESRAI +YI +++  +   L   G  +  A + VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:   47 LKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 129.413 bits (324), Expect = 2.088e-29
Identity = 74/165 (44.85%), Postives = 101/165 (61.21%), Query Frame = -3
Query:  260 NPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 748
            NPFGQVP L+ GD  LFESRAI +Y A++      +L   G  +  A + VW EVEA Q+    + + ++++  PM G TTD   V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:   50 NPFGQVPALQDGDLYLFESRAICKYAARK---NKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.937e-28
Identity = 73/169 (43.20%), Postives = 103/169 (60.95%), Query Frame = -3
Query:  260 LSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPM-FGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 757
            L+ NPFGQVP L+ GD  L+ESRAI +Y+ ++      +L   G  K  A + VW EVE+ Q+ P  + + ++ + +PM FG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:   47 LARNPFGQVPALQDGDLFLWESRAICKYVCRK---NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.146e-27
Identity = 70/164 (42.68%), Postives = 98/164 (59.76%), Query Frame = -3
Query:  266 PFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQL---TCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 745
            PFGQVP +E G  KLFESRAI +Y A ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:   50 PFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQ--WVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.685e-26
Identity = 71/164 (43.29%), Postives = 96/164 (58.54%), Query Frame = -3
Query:  275 LSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDK---GTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 757
            L+ NPFG+VPVLE GD  LFESRAI +++ ++   +   G +L    +  A + VW EVEA Q  PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:   49 LARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKPELLGGGRL----EQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.449e-22
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = -3
Query:  275 LSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 757
            + LNPF ++P  + GD  LFESRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   47 VQLNPFAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.154e-20
Identity = 60/169 (35.50%), Postives = 90/169 (53.25%), Query Frame = -3
Query:  275 LSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 757
            + LNPF ++P  + G+    +SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   47 VQLNPFAKMPGFQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.165e-18
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = -3
Query:  308 NPFGQVPVLEHGD-QKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWK--EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAA 748
            +PFG +PVLE  D  K++ESRAI++Y+  ++    + L  P  P A  L  +   VE   FDPP+S L +E V+  M G+ T+    ++    L   +D YE  LS+ KYLA + FTL DL HLP    ++      + D++PHV AW A
Sbjct:   51 HPFGVIPVLEDEDGTKIYESRAISRYLVAKYGKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLP-YGAMVAQLEPTVLDSKPHVKAWWA 199          
BLAST of CN186311 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.151e-11
Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = -3
Query:  227 FLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPD---KGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENE-AKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPV-KKLFDARPHVSAWAADITSRPAWAKVLALLKH-*TLCPLPTRR 760
            FL +NP G+VPVLE  +  +FES AI +Y++++  D    G+ L       A +  W +  +L+ D  ++ L W   + P  G     A  EE   + L + L+     L+ + +L   S TL D+  + N+NL   T + KK   A PHV  +   + ++P + KVL   K    + P+PT++
Sbjct:   45 FLKMNPIGKVPVLETPEGPIFESNAIARYVSRKNGDNSLNGSSLI----EYAHIEQWIDFSSLEID--ANMLKW---FAPRMGYAPFSAPAEEAAISALKRGLEALNTHLASNTFLVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHVERYFWTMVNQPEFKKVLGDAKQTEAVPPVPTKK 219          
The following BLAST results are available for this feature:
BLAST of CN186311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTF3_ARATH2.231e-3144.97Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_ORYSJ1.598e-2942.26Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF1_MAIZE2.088e-2944.85Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF2_ORYSJ3.937e-2843.20Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF7_ARATH1.146e-2742.68Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF4_MAIZE3.685e-2643.29Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT1.449e-2238.46Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT5.154e-2035.50Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH2.165e-1838.67Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]
EF1G2_ARATH1.151e-1130.43Probable elongation factor 1-gamma 2 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002L08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002L08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186311 ID=CN186311; Name=CN186311; organism=Citrus sinensis; type=EST; length=762bp
TATCTCCGCTTCGTTTATTAGGGTACATAGATAAAATCAATACTCAAGCC
ATCAACATCAAAGTTGAATATGAGGCAGCGCTGTTGAAATACAAAAGCGG
TAGTACAAACTACAAAGCATCAATATTCTGCAGAATATTGATGACAAACG
CCAAACAAGAGAATACGAACTCGAAAACCAGCCTAATAGGTATTACAAAA
GATAAGTGACCACCGAGGAGCGACTAACGTCTAGTAGGTAGCGGGCAGAG
TGTTCAGTGTTTGAGCAAGGCAAGGACCTTAGCCCAAGCCGGTCTGGAAG
TGATATCAGCTGCCCATGCGCTAACATGGGGGCGTGCATCAAACAGCTTC
TTGACAGGCGTCCCCAACAACAAATTAATATTGGGGAGATGATGCAAATC
GACCAAGGTGAAGCTGTCGCACGCCAAGTATTTGGACTGAGACAAACGGG
CCTCGTAAACATCTAAAATTTTGGCAAGCTTAGCTTCATTTTCTTCAACC
GCAGCTGGATCAGTGGTCATTCCAAACATTGGCTTGTACACGAGCTCCCA
GTTGAGCTTCGATGATGGGGGGTCGAACTGGAGTGCCTCCACCTCCTTCC
ATACCAATAACGGGGCGATGGGCTTGCCTGGGCATGTTAACTGGGTGCCT
TTGTCTGGAAACTCCTGGGCGATGTATTGGGTGATTGCCCTTGATTCGAA
GAGCTTCTGGTCGCCGTGTTCAAGCACCGGAACTTGACCGAATGGATTCA
AAGAAAGGAAGG
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