CX043705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 9.679e-78 Identity = 138/219 (63.01%), Postives = 166/219 (75.80%), Query Frame = 2 Query: 17 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 T K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NW+ESS WDGRY LVVC D AVY G RPTGGA AV ML+GP AP+ E LRG+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD Sbjct: 49 TWPKDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNPRPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALD 267
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS2_PIG (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.156e-77 Identity = 137/219 (62.56%), Postives = 167/219 (76.26%), Query Frame = 2 Query: 17 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 T K+VGILA+++YFP V Q LE D G+YT+GLGQ M FCS ED+ S+ LT V L+E+ ++ +G LEVG+ET+IDKSKS+KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NWVESS+WDGRY +VVC D AVY G +RPTGGA AV MLVGP+AP+A E LRG+HM +AYDFYKPN SEYP+VDGKLS CYL ALD Sbjct: 49 TWPKDVGILALEVYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQEDINSLCLTVVQRLMERTQLPWDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWVESSAWDGRYAVVVCGDIAVYPRGNSRPTGGAGAVAMLVGPEAPLALERGLRGTHMENAYDFYKPNATSEYPLVDGKLSIQCYLRALD 267
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 3.678e-77 Identity = 137/219 (62.56%), Postives = 167/219 (76.26%), Query Frame = 2 Query: 17 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 T K+VGILAM++YFP V Q LE + G+YT+GLGQ M FCS EDV S+ LT V L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NW+ESSSWDGRY LVVC D AVY G ARPTGGA AV MLVGP+AP+ E LRG+HM + YDFYKP++ SEYP+VDGKLS CYL ALD Sbjct: 49 TWPKDVGILAMEVYFPAQYVDQTELEKFNKVEAGRYTVGLGQTQMGFCSVQEDVNSLCLTVVQQLMERTQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLVGPEAPLVLERGLRGTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALD 267
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 7.669e-75 Identity = 136/215 (63.26%), Postives = 168/215 (78.14%), Query Frame = 2 Query: 29 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 +VGI+A+++ FP V Q LE +D S GKYT+GLGQ M FC++ ED+ S+ LT V+ L+E++ I QIGRLEVG+ET++DKSKS+KT LMQ+F+ NTDIEGVD+ NACYGGT+ALFN ++WVESSSWDGRY LVV D AVYA+G ARPTGGA AV MLVG +AP+ F+ +R SHM HAYDFYKP+L+S YP VDGKLS CYL ALD Sbjct: 5 DVGIVALELIFPSQYVDQVDLEVYDNVSAGKYTVGLGQARMGFCTDREDINSLCLTVVSRLMERWSIPYSQIGRLEVGTETLLDKSKSVKTVLMQLFKD--NTDIEGVDTVNACYGGTSALFNAISWVESSSWDGRYALVVAGDIAVYAKGSARPTGGAGAVAMLVGANAPLVFDRGVRSSHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALD 217
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.002e-74 Identity = 130/216 (60.19%), Postives = 168/216 (77.78%), Query Frame = 2 Query: 26 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 K++GI A+DIYFP T V Q L+ +D S GKYTIGLGQ M+F + ED++SM++T+V ++ KY ID + IGRLEVG+ET+IDKSKS+K+ +M +F+++GNT +EGVD+ NACYGGT ALFN + W+ESS WDGRY LVV D AVY++G ARPTGGA V ML+GP+A + F+ LRG+HM + DFYKP+L+SEYP VDGKLS CYL ALD Sbjct: 5 KDIGICAIDIYFPQTYVNQSELKKYDKVSNGKYTIGLGQTNMSFVGDREDIVSMAMTSVKMMMSKYSIDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGTNALFNSLQWIESSYWDGRYALVVTGDIAVYSKGAARPTGGAGVVTMLIGPNATLIFDQSLRGTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALD 220
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS_YEAST (Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae GN=ERG13 PE=1 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 3.806e-74 Identity = 132/220 (60.00%), Postives = 167/220 (75.91%), Query Frame = 2 Query: 14 KTMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 KT +NVGI + IY P CV Q LE DG S+GKYTIGLGQ M+F ++ ED+ SMSLT ++ L++ Y ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F + NTD+EG+D+ NACYGGT ALFN +NW+ES++WDGR +VVC D A+Y +G ARPTGGA V M +GPDAP+ F+S +R S+M HAYDFYKP+ SEYP VDG S TCY+ ALD Sbjct: 43 KTRPQNVGIKGIQIYIPTQCVNQSELEKFDGVSQGKYTIGLGQTNMSFVNDREDIYSMSLTVLSKLIKSYNIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGE--NTDVEGIDTLNACYGGTNALFNSLNWIESNAWDGRDAIVVCGDIAIYDKGAARPTGGAGTVAMWIGPDAPIVFDS-VRASYMEHAYDFYKPDFTSEYPYVDGHFSLTCYVKALD 259
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS_SCHPO (Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe GN=hcs1 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.939e-71 Identity = 128/216 (59.26%), Postives = 164/216 (75.93%), Query Frame = 2 Query: 26 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 K++GI + +Y P V+Q ALEAHDG S GKYTIGLG MAF + ED+ S LTA++ L+++Y+ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F N ++EG+D NACYGG ALFN ++W+ESS+WDGR G+VV D A+YA+G ARPTGGA V +LVGP+AP+ FE LRG++M HAYDFYKP+L SEYP VDG S CY+ ALD Sbjct: 6 KDIGIKGLVLYTPNQYVEQAALEAHDGVSTGKYTIGLGLTKMAFVDDREDIYSFGLTALSQLIKRYQIDISKIGRLEVGTETIIDKSKSVKSVLMQLFGD--NHNVEGIDCVNACYGGVNALFNTIDWIESSAWDGRDGIVVAGDIALYAKGNARPTGGAGCVALLVGPNAPIVFEPGLRGTYMQHAYDFYKPDLTSEYPYVDGHFSLECYVKALD 219
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS2_BLAGE (Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica GN=HMGCS-2 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.553e-70 Identity = 126/216 (58.33%), Postives = 163/216 (75.46%), Query Frame = 2 Query: 26 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD 673 ++VGI+ +++ FP V Q LE +D S GKYT+GLGQ+ M C++ ED+ S+ LTAV L+E+ ID IG LEVG+ET++DK KS+KT LMQ+FE+ GNTD+EG+D+ NACY GTAALFN + W+ESSSWDGRY +VV D A+YA+ PTGGA A++ML+G +AP+ + +R SHM HAYDFYKP+L SEYPVVDGKLS CYL ALD Sbjct: 6 EDVGIIGIEMIFPSLYVDQAELETYDEVSPGKYTMGLGQDKMGVCTDREDINSLCLTAVDKLMERNNIDYNDIGWLEVGTETILDKVKSVKTVLMQLFEESGNTDVEGIDTINACYRGTAALFNALIWIESSSWDGRYAIVVAADIAIYAK-ECSPTGGAGALLMLIGANAPIVIDRGVRASHMKHAYDFYKPDLMSEYPVVDGKLSVQCYLSALD 220
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: HMCS_CAEEL (Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans GN=F25B4.6 PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.151e-54 Identity = 111/221 (50.23%), Postives = 146/221 (66.06%), Query Frame = 2 Query: 17 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE-SSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKP--NLASEYPVVDGKLSQTCYLMAL 670 T +VGI A+++YFP V Q LE + S GKYTIGLGQ+ M FCS+ ED++S+SLT L+E YKI IG L VG+ET+IDKSKS+KT LM +F GN+DIEGVD NAC+GG AL + ++WV + D + +VV D A+Y EGPAR TGGA A+ L+ PDA + + + HM + +DF+KP + SEYPVVDG LS + YL A+ Sbjct: 9 TPVTDVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYKISTDSIGCLVVGTETMIDKSKSVKTALMDLFP--GNSDIEGVDIKNACFGGAQALLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGPARCTGGAGAIAFLICPDASIPIDRQFSACHMKNTWDFFKPITPIPSEYPVVDGSLSLSSYLEAV 227
BLAST of CX043705 vs. ExPASy Swiss-Prot
Match: Y1379_METKA (UPF0219 protein MK1379 OS=Methanopyrus kandleri GN=MK1379 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 61/210 (29.05%), Postives = 94/210 (44.76%), Query Frame = 2 Query: 23 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS 646 ++ VGI+ Y P ++ E + A G GL E + SE ED ++++ A N + + +IDPK IG + VGSE+ ++K + G T D+ D AC GTAA+ C V S +YGL + D+A A G P T A ++G VA E + S+ + DF++ YP G+ + Sbjct: 4 SERVGIVGYGAYVPRYRIKAEEIAAVWGDDVDSIKSGLMIEEKSVPSETEDSATIAVEAAKNAVARAEIDPKDIGAIYVGSES---PPYAVKPTATIVAAAIGATPDLTAADYEFACKAGTAAIQTCAGLVASGMI--KYGLAIGADTAQGAPGDPLEYTAAAGGAAFVIGRKKLVA-EMEGTYSYTTDTPDFWRRE-GQPYPRHGGRFT 206 The following BLAST results are available for this feature:
BLAST of CX043705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043705 ID=CX043705; Name=CX043705; organism=Citrus sinensis; type=EST; length=675bpback to top |