EY665744

Overview
NameEY665744
Unique NameEY665744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAA (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pdxS PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.414e-43
Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTGN++EAVRH R+V  +IR L++M++DE+FT+AK+I APY+LV Q    G+LPVV+F            ++MQLG D            +PVKRA+ IV   THY+DPE++ EV
Sbjct:  118 HKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQVATEGKLPVVNFAAGGIATPADAALLMQLGVDGIFVGSGIFKSGDPVKRARAIVEATTHYNDPEIIAEV 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAD (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pdxS PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.118e-43
Identity = 83/149 (55.70%), Postives = 106/149 (71.14%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H FR+PFVCGCRNLGEALRRI EGAAM+RTKGEAGTGN++EAVRH R+V  +IR L++M++DE+FT+AK+I APY+LV Q    G+LPVV+F            ++MQLG D             P+KRA+ IV   THY+DPE++ EV
Sbjct:  118 HKFRVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQVATEGKLPVVNFAAGGIATPADAALLMQLGVDGIFVGSGIFKSGNPIKRARAIVEATTHYNDPEIIAEV 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_ROSCS (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pdxS PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.174e-43
Identity = 82/149 (55.03%), Postives = 104/149 (69.80%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H FRIPFVCGCRNLGE LRR+ EGAAM+RTKGEAGTGN++EAVRH R+V  +IR L+ MD+DE+FT+AK I APY+LV Q  + GRLPVV+F            ++MQLG D            +P +RA+ IV   THY++PE++ EV
Sbjct:  118 HKFRIPFVCGCRNLGEGLRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQTMDEDELFTYAKNIQAPYELVRQVAESGRLPVVNFAAGGIATPADAALLMQLGVDGVFVGSGIFKSGDPARRARAIVAATTHYNEPEIIAEV 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX1_SCHPO (Probable pyridoxine biosynthesis PDX1-like protein OS=Schizosaccharomyces pombe GN=snz1 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.174e-43
Identity = 84/147 (57.14%), Postives = 106/147 (72.11%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCG RNLGEALRRI EGAAMIRTKGEAGTG+++EAVRH R + G++R +++M  DE++T+AK+IAAP DLV +  QLGRLPVV+F            +MMQLGCD            +P KRA+ IVR VTHY+DP++L EV
Sbjct:  123 FTVPFVCGSRNLGEALRRISEGAAMIRTKGEAGTGDVVEAVRHTRQMQGELRRVKSMSPDELYTYAKEIAAPIDLVKECAQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFLSGDPAKRARAIVRAVTHYNDPKILAEV 269          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX1_DICDI (Probable pyridoxine biosynthesis protein pdx1 OS=Dictyostelium discoideum GN=pdx1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.498e-40
Identity = 79/147 (53.74%), Postives = 107/147 (72.79%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCGCRNLGEALRRI EGAAMIRTKGEAGTG+++EAVRH R+V  +I+ ++NMD  E++T+AK+I AP +LV + K+LGRLPVV+F            MMMQLG D            +P KRA+ IV+ VTH+++P+++ +V
Sbjct:  130 FKVPFVCGCRNLGEALRRISEGAAMIRTKGEAGTGDVVEAVRHARAVNKEIKKIQNMDPHELYTYAKEIQAPLELVKEVKRLGRLPVVNFAAGGVATPADAAMMMQLGMDGVFVGSGIFKSGDPAKRAKAIVQAVTHFNNPQIVAKV 276          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_HERA2 (Pyridoxal biosynthesis lyase pdxS OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=pdxS PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.269e-40
Identity = 80/149 (53.69%), Postives = 100/149 (67.11%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNF++PFVCG RNLGEALRRI EGAAMIRTKGEAGTGN++EAVRH R++  +IR L+ +D DE+F  AK + APY+LV Q  +LGRLPVV+F            +MMQLG D             P KRA+ IV   TH+ D ++L E+
Sbjct:  118 HNFKVPFVCGARNLGEALRRITEGAAMIRTKGEAGTGNVVEAVRHARTMFAEIRRLQTLDPDELFVAAKNLQAPYELVKQIAELGRLPVVNFAAGGIATPADAALMMQLGVDGVFVGSGIFKSGNPAKRAKAIVEATTHFRDAKLLAEI 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_DEHE1 (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides ethenogenes (strain 195) GN=pdxS PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.608e-39
Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H+F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGNI+EAVRH+RSVMG +R +++M  DE+  +AK+I AP +LV++  + G+LPVV+F            +MMQLG D            +P   A+ +V+ VTHY D +VL E+
Sbjct:  118 HDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSADELSAYAKEINAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSSDPAAMAKAVVKAVTHYKDAKVLAEI 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSC (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain CBDB1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.037e-39
Identity = 77/149 (51.68%), Postives = 103/149 (69.13%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H+F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGNI+EAVRH+RSVMG +R +++M  DE+  +AK+I AP +LV++  + G+LPVV+F            +MMQLG D             P   A+ +V+ VTHY D ++L E+
Sbjct:  118 HDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSPDELSAYAKEINAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSSNPSAMAKAVVKAVTHYKDAQILAEI 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSB (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain BAV1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.037e-39
Identity = 77/149 (51.68%), Postives = 103/149 (69.13%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H+F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGNI+EAVRH+RSVMG +R +++M  DE+  +AK+I AP +LV++  + G+LPVV+F            +MMQLG D             P   A+ +V+ VTHY D ++L E+
Sbjct:  118 HDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSPDELSAYAKEINAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSSNPSAMAKAVVKAVTHYKDAQILAEI 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_CLOCE (Pyridoxal biosynthesis lyase pdxS OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=pdxS PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.050e-38
Identity = 73/149 (48.99%), Postives = 102/149 (68.46%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H F++PFVCG +NLGEALRRI EGA+MIRTKGEAGTGN++EAVRH+R+V  +IR +++    E+ T AK+  APYDL++   + G+LPV++F            +MMQLGCD            +P KRA+ IV+  T+Y+DP+++ EV
Sbjct:  117 HTFKVPFVCGAKNLGEALRRISEGASMIRTKGEAGTGNVVEAVRHMRTVTNEIRKVQSASKQELMTIAKEFGAPYDLILYVHENGKLPVINFAAGGIATPADAALMMQLGCDGVFVGSGIFKSSDPAKRAKAIVKATTYYNDPQIIAEV 265          
The following BLAST results are available for this feature:
BLAST of EY665744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_CHLAA2.414e-4355.70Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]
PDXS_CHLAD4.118e-4355.70Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]
PDXS_ROSCS9.174e-4355.03Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus c... [more]
PDX1_SCHPO9.174e-4357.14Probable pyridoxine biosynthesis PDX1-like protein... [more]
PDX1_DICDI2.498e-4053.74Probable pyridoxine biosynthesis protein pdx1 OS=D... [more]
PDXS_HERA27.269e-4053.69Pyridoxal biosynthesis lyase pdxS OS=Herpetosiphon... [more]
PDXS_DEHE13.608e-3952.35Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoid... [more]
PDXS_DEHSC8.037e-3951.68Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoid... [more]
PDXS_DEHSB8.037e-3951.68Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoid... [more]
PDXS_CLOCE1.050e-3848.99Pyridoxal biosynthesis lyase pdxS OS=Clostridium c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665744 ID=EY665744; Name=EY665744; organism=Citrus sinensis; type=EST; length=873bp
CCCGCGTCCGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACT
TGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACG
AAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCG
GTCTGTGATGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGG
TGTTCACTTTCGCAAAGAAGATAGCGGCGCCGTACGACTTGGTGATGCAG
ACGAAGCAGCTGGGGCGGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGT
GGCGACGCCGGCGGATGCAGCGATGATGATGCAACTTGGATGCGACGGAG
TGTTTGTCGGGTCGGGCGTGTTTAAGAGCGGGGAACCGGTGAAGCGGGCC
CAGGGAATTGTACGGGGGGTGACTCATTACAGTGACCCGGAGGTGTTGGG
GGAGGTGGAACCTGCCGGTTGCGCGACGCCCTGGGGGCTCTTATTTCTCA
GCGCACCCAACGATGCAGAAGTCCCACATCCCTCTCACACAAAATCATAC
TAAGACCATCCACAACCCCCTTATATGCACTATTATACTTTCCGACACCC
CTATTCCCGTACGCAAACTGTGATCGCCCCGGATACGCCCGCGCCTTCTG
CCCGACATTCGGGGCACCCCCCAGCTCCCCACCGCTCTGTCGCTTTTCTA
CTTTGTTGCTCGTGCCTTCTCCTAATTTGCCCCTCGTCCTCCATCTTCAT
CTCTGCCCCCTATTCTGTTCCTGCCACATGCGTCATCTGCACACGTCAGC
ATCTGTACCTTTGATCTGCACATAAAGACACGTCTACGAAGCGGGAAATT
TTCCTCATGTTTCCTCGCCCCAG
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