CN186277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 188.734 bits (478), Expect = 3.241e-47 Identity = 102/223 (45.74%), Postives = 148/223 (66.37%), Query Frame = -2 Query: 132 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 800 +L EM L E F+++YLG H+GR+L WQT +G A +KA F +G+K E VS +Q VL++FN D S+ EI+ AT I S+L+R LQSLAC + + VL K P K++ + D F N +F K +++KI + KE+ E+ T +RV +DR+ QI+AAIVRIMK R+ L HN +++E+ QL +F P ++KKRIESLI+RD++ERD + Y Y+A Sbjct: 542 HLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR-VLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQ-IQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQL--KFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 759
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.904e-39 Identity = 94/227 (41.41%), Postives = 136/227 (59.91%), Query Frame = -2 Query: 132 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 812 S NLP+EM E F+ +Y R+L+W ++G+ I F + + EL VSTYQ VL+LFN D+LSY EI + DL R L SL+C + K +L KEP +K + ++DAF N KFT + ++KI E+++ + V++DR+ I+AAIVRIMKSR+VL H +++E +QL F + IKKR+E LI RD+LERD + ++RYLA Sbjct: 519 SFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQ-KAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYK-ILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVD-----ERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL4_SCHPO (Cullin-4 OS=Schizosaccharomyces pombe GN=cul4 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.390e-36 Identity = 80/230 (34.78%), Postives = 139/230 (60.43%), Query Frame = -2 Query: 135 PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA---DRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYL 815 P LP +M + F +YL G+++SW ++G +KA F G K EL++S +Q CVL+ FNN + +SY++++++TE+ DL R LQSL+C R + ++ P SK D F+VN+KFT K Y+VKI + KE E + +++V DR+ +++A+IVR+MK + + H++++ V ++ R + +++K IE L+E+++LER+ D +Y Y+ Sbjct: 509 PESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNK-ELSISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMV-PKSKKPSPDTMFYVNEKFTDKLYRVKINQIYL-KEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLERE--DNDIYTYV 733
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL2_PONAB (Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.179e-35 Identity = 83/228 (36.40%), Postives = 141/228 (61.84%), Query Frame = -2 Query: 132 PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 815 PS T +P E+ + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+E++ +T++ +L + ++SL V+ ++ + +DI + +F +N F+SK K KI T + QK++ E ++TR V+EDRK ++AAIVRIMK+R+VL HN +I EV Q ++RF + + IKK IE LI++ ++ER Y Y+A Sbjct: 523 PSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVK---MINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSM-QKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL2_HUMAN (Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.179e-35 Identity = 83/228 (36.40%), Postives = 141/228 (61.84%), Query Frame = -2 Query: 132 PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 815 PS T +P E+ + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+E++ +T++ +L + ++SL V+ ++ + +DI + +F +N F+SK K KI T + QK++ E ++TR V+EDRK ++AAIVRIMK+R+VL HN +I EV Q ++RF + + IKK IE LI++ ++ER Y Y+A Sbjct: 523 PSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVK---MINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSM-QKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL2_MOUSE (Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.846e-35 Identity = 83/228 (36.40%), Postives = 141/228 (61.84%), Query Frame = -2 Query: 132 PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 815 PS T +P E+ + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+E++ +T++ +L + ++SL V+ ++ + +DI + +F +N F+SK K KI T + QK++ E ++TR V+EDRK ++AAIVRIMK+R+VL HN +I EV Q ++RF + + IKK IE LI++ ++ER Y Y+A Sbjct: 523 PSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVK---MINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSM-QKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.154e-34 Identity = 89/262 (33.97%), Postives = 139/262 (53.05%), Query Frame = -2 Query: 132 PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA---DRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMS-------------------------------KDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 815 P + LP E E F +YL H G+ L WQ + +KA F +G+K EL+VS +Q +L LFN+ LS+R+I+ T + +LK+ L SL + +++K+ + K I E D F N KF+SK +K+K+ ++ Q+ E E Q+T + + DR+ Q++AAIVRIMK+R+ L HN +I+E+ L +F P ++KKRIE LIE+++L RD + +Y Y+A Sbjct: 545 PPIEATLPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKK-ELSVSLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVE-ENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLL--KFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.252e-31 Identity = 85/231 (36.80%), Postives = 134/231 (58.01%), Query Frame = -2 Query: 132 PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMS-KDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 815 PS ++P E+ A + F+ +Y H+GR+L+W ++ ++K + + K + L STYQ+ VL+ FN + L+ EI+++T++ S LK L SLA + K +L P+ ++I + F +N +F +K K+ I V + E E + VEEDRK QI+AAIVRIMK R+ L H+ ++ EV QLQ+RF IKK I+ LIE+++L R + Y Y+A Sbjct: 543 PSTNFSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSLA--KSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKE-EIDSIHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGKKDHYSYVA 770
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_SCHPO (Cullin-1 OS=Schizosaccharomyces pombe GN=cul1 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.333e-29 Identity = 77/226 (34.07%), Postives = 130/226 (57.52%), Query Frame = -2 Query: 144 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFF-VNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLY 812 +V +LP E+ L E F++YY H GR+LSW ++ +IKA + VSTYQM VL+L+N+ D +Y E+ + T + L L ++ K +L + + +G+ ++ + +N+ F K +V++ + + E + E ET + +EEDRK +++AIVRIMK+RR L H ++ E Q++SRF ++IK+ I+ LIE+++LER D +Y Sbjct: 545 NVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIF--LKAKVLLLGD--NDKLGDPNSTYKINENFRMKKIRVQLNLPI-RSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQGRDEYIY 765
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL4_CAEEL (Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 6.788e-29 Identity = 79/233 (33.91%), Postives = 130/233 (55.79%), Query Frame = -2 Query: 132 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCL----------QSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 800 N+P EM ++ +Y H R + W + SA I A+F G K EL + YQ +L+LFN + + EI + T+I ++ + + + L V G +KE +++ +++ F VN KFT K +V+I V K + E +E ++ V DR+ +I+AA+VRIMK+R+ L+H ++ E+ +QL RF + +IKKR+ESLIER+++ RD + Y Y+A Sbjct: 612 NIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENL-KNEKFVVNSKFTEKRCRVRIAQVNI-KTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840 The following BLAST results are available for this feature:
BLAST of CN186277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186277 ID=CN186277; Name=CN186277; organism=Citrus sinensis; type=EST; length=816bpback to top |