CN186277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL5_DICDI (Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29 Identity = 75/227 (33.04%), Postives = 127/227 (55.95%), Query Frame = -2 Query: 132 PAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA---QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLER---DNVDRKLYRYLA 794 P+EM + F S+Y ++ GR L++ + AD+ + KG+ ++L + YQM +L++FN AD+++ I + + ++ L LA ++ + EP K+ D F VN KF+SK KV V K+SE ++ + Q +E++R +++AAIVRIMKS++ + HN++ E T Q+ F T IKK IE LI+++++ R DN + Y Y+A Sbjct: 526 PSEMLSSITYFESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGLDETSIR--LPLLALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYLIDQEYIRRTTDDNPSARKYEYMA 750
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27 Identity = 75/231 (32.47%), Postives = 130/231 (56.28%), Query Frame = -2 Query: 132 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSK----DIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 812 S T LP+E+ ++F ++Y H+GR+L+W + ++ K ++ L ST+QM +L+ +N D + +++ +T+I L + LQ L ++ K ++ ++ + ++ D + + +K +V I V + E + E++ T + +EEDRK I+AAIVRIMK R+VL H ++ EV QL SRF IKK I+ LIE+++LER + ++ Y YLA Sbjct: 550 SCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNIN-VPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27 Identity = 75/231 (32.47%), Postives = 130/231 (56.28%), Query Frame = -2 Query: 132 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSK----DIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 812 S T LP+E+ ++F ++Y H+GR+L+W + ++ K ++ L ST+QM +L+ +N D + +++ +T+I L + LQ L ++ K ++ ++ + ++ D + + +K +V I V + E + E++ T + +EEDRK I+AAIVRIMK R+VL H ++ EV QL SRF IKK I+ LIE+++LER + ++ Y YLA Sbjct: 550 SCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNIN-VPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27 Identity = 75/231 (32.47%), Postives = 130/231 (56.28%), Query Frame = -2 Query: 132 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSK----DIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 812 S T LP+E+ ++F ++Y H+GR+L+W + ++ K ++ L ST+QM +L+ +N D + +++ +T+I L + LQ L ++ K ++ ++ + ++ D + + +K +V I V + E + E++ T + +EEDRK I+AAIVRIMK R+VL H ++ EV QL SRF IKK I+ LIE+++LER + ++ Y YLA Sbjct: 550 SCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNIN-VPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL6_CAEEL (Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.865e-27 Identity = 74/223 (33.18%), Postives = 121/223 (54.26%), Query Frame = -2 Query: 132 LPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFF-VNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 797 LP E+S + ++F ++Y +H GRRL+W + ++ + + +K+ V+ Q+C L LFN D + +I +A E+ A + SL V ++ + KD DA +N K+ +K +V + T + + ++ E + VE DRK +I+A IVRIMK+R+ L H +I E+ QL+SRF N IK IE LIE+ ++ R + +Y YLA Sbjct: 508 LPRELSTILKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFE-KKYVFIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL2_DICDI (Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.414e-26 Identity = 74/255 (29.02%), Postives = 134/255 (52.55%), Query Frame = -2 Query: 132 LPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDD---------------------------------AFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 797 +P E++ F+ YY H GR+L+W ++ A+ K+ F K + ++ V+ +Q+ +L++FN + +S EI + T + ++L R LQSL + K ++ K+ I ++ + VN +++K KVK+ + + QKE+ + +ET + ++EDRK ++A+IVRIMK+R+ ++H ++I EV + + RF N IKK IE LIE++++ R + Y Y A Sbjct: 521 VPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAK-KSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSL--IEAKILISKKKDQNSINNNNNNNNNNNNNGEGNNSLVDSANNMQPSSSSSSTQEYTVNSAYSNKRSKVKVSSSL-QKETPLQNEETYKGIDEDRKLYLQASIVRIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_DROME (Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.730e-24 Identity = 71/224 (31.70%), Postives = 117/224 (52.23%), Query Frame = -2 Query: 132 LPAEMSALCEKFRSYYLGTHTGRRLSWQTNM--GSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 797 LP+E+ +F +Y H+GR+L+W M G + + L ST+QM VL+ FN+ + ++++ T+ +L + LQ L + VL + + + + +K ++ I + + E + E++ + +EEDRK I+AAIVRIMK R+ L+H N+I+EV QL +RF IKK I+ LIE+++LER + Y YLA Sbjct: 555 LPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQILLKAK---VLTSSDNENSLTPESTVELFLDYKNKKRRININQPL-KTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL1_CAEEL (Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.951e-24 Identity = 71/234 (30.34%), Postives = 118/234 (50.43%), Query Frame = -2 Query: 132 PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLA---CVRGKNVLRKE---PMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 815 P+ LP ++S E F +Y GRRL+W + +I +T +K+ +T QMC ++LFN D + +I AT++ + SL ++ L+KE PM+ + +N + +K +V + ++++ + + ++ VEEDRK I A IVRIMK+R+ + H ++ EV QL RF IK+ I SLIE++++ R + LY YLA Sbjct: 554 PTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITST-AFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVS------LNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL2_CAEEL (Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.499e-23 Identity = 67/225 (29.78%), Postives = 121/225 (53.78%), Query Frame = -2 Query: 132 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQ--RVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 800 +LP + + ++F +Y G H GR+L+W NM D++ T+ +++ + YQM L+ F D + ++I + + L + ++++ V +L + +++ D +N TSK K ++ K E E++ +V +DRK +E AIVRIMK+R+VL HN ++ E+ Q + RF + IKK IE LIE+ +++R + + + Y+YLA Sbjct: 559 HLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTY-LDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTIRTILDV---TLLTCD--DQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 776
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3_YEAST (Cullin-3 OS=Saccharomyces cerevisiae GN=CUL3 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.038e-22 Identity = 65/227 (28.63%), Postives = 113/227 (49.78%), Query Frame = -2 Query: 132 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVV----AQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 800 +LP MS + F YY + R L W ++ +I F G +E++ S Y + +LF + + L+ EI + T IP D+K + S++ + +L+K S ++ F VN F+S KVK+ + +QK + + + ++ A IVRIMK+ L H ++ TK+ QSR P+ +K+ I+ LIE+++++R+ D Y YL+ Sbjct: 523 SLPPRMSQILAGFEGYYSLKYKERVLKWAHHLSVIEIGCQFNSGY-YEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSMSTIPRCKILKKSSSSGNM----KFSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADDPSYYHYLS 744 The following BLAST results are available for this feature:
BLAST of CN186277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186277 ID=CN186277; Name=CN186277; organism=Citrus sinensis; type=EST; length=816bpback to top |