CN186277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL5_PONAB (Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20 Identity = 75/241 (31.12%), Postives = 125/241 (51.87%), Query Frame = -2 Query: 132 VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 809 V +LP E+ L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL EP KD E F VN +F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 543 VFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL5_HUMAN (Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4) HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20 Identity = 75/241 (31.12%), Postives = 125/241 (51.87%), Query Frame = -2 Query: 132 VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 809 V +LP E+ L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL EP KD E F VN +F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 543 VFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20 Identity = 74/241 (30.71%), Postives = 124/241 (51.45%), Query Frame = -2 Query: 132 VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 809 V +LP E+ L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL +P KD E F VN F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 543 VFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.859e-19 Identity = 73/241 (30.29%), Postives = 124/241 (51.45%), Query Frame = -2 Query: 132 VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 809 V +LP E+ L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL +P KD E F VN F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK+++E LIE ++ RD D + Y+A Sbjct: 543 VFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL5_RABIT (Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18 Identity = 73/241 (30.29%), Postives = 122/241 (50.62%), Query Frame = -2 Query: 132 VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 809 V +LP E+ L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL EP KD E F VN +F+ K KV+ IG + Q +E ++E + + + R + ++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 543 VFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL5_CAEEL (Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16 Identity = 64/240 (26.67%), Postives = 118/240 (49.17%), Query Frame = -2 Query: 132 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA--DRLSYREIEQATEIPASDLKRCLQSLAC---VRGKNVLRKEP----MSKDIGEDDAFFVNDKF-------TSKFYKVK-IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 800 +LP E+ + ++Y H GR+L W + S + G + +L +T+QM VL FN+ D++S + ATE+P ++L R L SL +R + +L P ++D + F +N F + + KV IG + E+ EK+ + + R+ +++ IV+I+K+R+ + E+ + L+ F+ N IK++I+ LIE ++ER D + Y++ Sbjct: 528 SLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKE--HESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 765 The following BLAST results are available for this feature:
BLAST of CN186277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186277 ID=CN186277; Name=CN186277; organism=Citrus sinensis; type=EST; length=816bpback to top |