CN186273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METM7 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rplP0 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15 Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 221 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPLS 730 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L L +I T+ + AP + G AP D+ V G+TG+ P S + + IP I+KG + I ++++G+ V A +L+ LGI+P++ Sbjct: 21 LKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVVKEGEVVSQKLAVVLSALGIKPVT 191
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METVS (Acidic ribosomal protein P0 homolog OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rplP0 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15 Identity = 51/171 (29.82%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 221 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPLS 730 L +LL+ I + V + QLQ IR +R + M +NT++KR + AE+TGN F L+ L ++ T+ + AP + G +AP D+ V G+TG+ P S + + IP I+KG + I + ++GD + A +L+ LGI+P++ Sbjct: 21 LKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLSALGIKPVT 191
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_PYRKO (Acidic ribosomal protein P0 homolog OS=Pyrococcus kodakaraensis GN=rplP0 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15 Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A AE K +L +++ Y I + V + L +R LRG +++ + +NT+++ I+ A++ G LI +QG ++ T+ + APA+ G V P DVV+P G T L P Q L IP +I KG V I +++ G+ + A +L LGI PL Sbjct: 2 AHVAEWKKKEVEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPL 184
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METMP (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis GN=rplP0 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15 Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 221 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPLS 730 L +LL+ I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L+ + +I T+ + AP + G +AP D+ V G+TG+ P S + + IP I+KG + I ++++G+ V A +L+ L I+P++ Sbjct: 21 LKELLKSSNIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAIAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKIVVKEGEVVSQKLAVVLSALDIKPVT 191
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METKA (Acidic ribosomal protein P0 homolog OS=Methanopyrus kandleri GN=rplP0 PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15 Identity = 57/182 (31.32%), Postives = 90/182 (49.45%), Query Frame = 2 Query: 191 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRG-DSVVLMGKNTMMKRTIRMHAEKTGNTAFLN-LIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 AE K +L +L++EY + + + + + QLQ IR LR D+++ M +NT+M+ + EK L L+ ++G V IFT D APA+ G +AP D+VVP G T +P S Q +P +I G V I L+++G+++ A +L KL I P+ Sbjct: 18 AEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALE---EKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPM 196
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_HALVO (Acidic ribosomal protein P0 homolog OS=Halobacterium volcanii GN=rplP0 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15 Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 2 Query: 218 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRP 724 +L +E Y + V + S QLQ++RR L G + V M +NT++ R + N F L + G V LI T + AP G VAP D+V+P G+TG+DP Q + +I G++ + ++ +G++V A +LA+LGI P Sbjct: 22 ELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVNDGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDPGPFVGELQQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVLAELGIEP 186
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METTL (Acidic ribosomal protein P0 homolog OS=Methanococcus thermolithotrophicus GN=rplP0 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14 Identity = 54/178 (30.34%), Postives = 85/178 (47.75%), Query Frame = 2 Query: 200 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPLS 730 KI KL +LL+ + + V + QLQ IR +RG + M +NT+++R I+ AE+TGN F L + +I T + AP + G VAP D+ V G+TG+ P + + IP I KG + I + + G+ V A +L+ LGI+P++ Sbjct: 14 KIEEVNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVAEETGNPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAPIKGGAVAPCDIEVKAGSTGMPPGPFLGELKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHKLAVVLSALGIKPVT 191
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METTH (Acidic ribosomal protein P0 homolog OS=Methanobacterium thermoautotrophicum GN=rplP0 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14 Identity = 52/183 (28.42%), Postives = 89/183 (48.63%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A AE K +L L++ Y + +A ++ + QLQ +R+ LR +++ M K T++ + + N L+ ++G LIFT + APA+ G +AP D+VVP G+TG P Q + IP KI KG + + +++ G+++ A +L +L I+PL Sbjct: 2 AHVAEWKKKEVQELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALEKAGRELENVDSLS--DYMEGQPALIFTDMNPFKLFKILEDSKTPAPAKPGAIAPDDIVVPKGDTGFAPGPILGELQQIGIPAKIEKGKIVVSNDHVVVKAGEEIPPKVAGILTRLDIQPL 182
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_META3 (Acidic ribosomal protein P0 homolog OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rplP0 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13 Identity = 51/176 (28.98%), Postives = 84/176 (47.73%), Query Frame = 2 Query: 200 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRP 724 KI L +LL+E I + V + QLQ IR +R + M +NT++KR I AE++ + F L L+ ++ T + AP + G +AP D+VV G+TG+ P + +P I+KG + I ++++G+ V A +L+ LGI+P Sbjct: 13 KIEEVNNLKKLLKEGQVIALVDMMEVPAVQLQEIRDNIRDLMTLRMSRNTLIKRAIEELAEESNDPKFAKLAECLERGAAIVITDMNPFKLYKTLEDGKAPAPIKAGAIAPSDIVVEAGSTGMPPGPFLGELKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPKVAVVLSALGIKP 188
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METS3 (Acidic ribosomal protein P0 homolog OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.346e-13 Identity = 49/183 (26.78%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A AE K +L L+++Y I + N+ + QLQ +R+ L +V+ M K ++ + N ++L ++G V +I T+ + APA+ G +A D+V+P G+TG +P Q + IP KI+KG + + L+ G++V ++ A+ L+++ I P+ Sbjct: 2 AHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKNN--IVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTLSRMDINPM 182 The following BLAST results are available for this feature:
BLAST of CN186273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186273 ID=CN186273; Name=CN186273; organism=Citrus sinensis; type=EST; length=735bpback to top |