CN186273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METST (Acidic ribosomal protein P0 homolog OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13 Identity = 46/172 (26.74%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 215 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A+L L + I + ++ + QLQ +R+ L ++++ M + K I++ E + L L+G ++FTK + APA+ G +AP D+VVP G+T P Q + IP KI+KG++ + +++ +G+++ + A +L KL I P+ Sbjct: 13 AELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSR----KNFIKIALENSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPM 180
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_METJA (Acidic ribosomal protein P0 homolog OS=Methanocaldococcus jannaschii GN=rplP0 PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.707e-13 Identity = 53/188 (28.19%), Postives = 87/188 (46.28%), Query Frame = 2 Query: 167 EMVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 E VKA A KI L L++ + + +V + QLQ IR +R + M +NT++ R ++ AE+ N L ++ ++ T + AP R G +AP D+ V G+TG+ P + + IP I KG + I +++KG+ V AA+L +LGI+P+ Sbjct: 2 ETKVKAHVAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPI 189
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_HALMA (50S ribosomal protein L10E OS=Haloarcula marismortui GN=rplP0 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.454e-13 Identity = 45/169 (26.63%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 221 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRP 724 + +++E Y + V + S QLQ++RR L G + + + +NT+++R + + +L + G VGLI T + AP G VAP D+V+P G+TG+DP Q + +I +G++++++ ++ G++V + +L +LGI P Sbjct: 23 IVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-----DDVDDGLEDLNGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEGDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGIEP 186
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_THEGJ (Acidic ribosomal protein P0 homolog OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 50/183 (27.32%), Postives = 85/183 (46.45%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A AE K +L ++++ + I + V + L +R LRG +++ + +NT+++ I+ A++ L ++G ++ T+ + APA+ G V P DVV+P G T L P Q L IP +I KG V I +++ G+ + A +L LGI PL Sbjct: 2 AHVAEWKKKEVEELTKIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELNKPDLEKLADYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVTIQKDYTVLKAGEVITEQLARILNALGIEPL 184
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_PYRHO (Acidic ribosomal protein P0 homolog OS=Pyrococcus horikoshii GN=rplP0 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12 Identity = 53/184 (28.80%), Postives = 87/184 (47.28%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A AE K +L +L++ Y I + ++ + L +RR +R + +L + +NT+++ I+ A++ G L+ + G++ T + APA+ G V P DVVVP G T L P Q L IP +I KG V I +++ G+ + A +L LGI+PL Sbjct: 2 AHVAEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPL 185
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_PYRFU (Acidic ribosomal protein P0 homolog OS=Pyrococcus furiosus GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12 Identity = 50/184 (27.17%), Postives = 89/184 (48.37%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A AE K +L L++ Y + + ++ + L +RR +R ++ +L + +NT+++ I+ A++ G LI ++G G++ T + APA+ G P DVV+P G T L P Q + IP +I +G V I +++ G+++ A +L LGI+PL Sbjct: 2 AHVAEWKKKEVEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQELGKPELEKLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPL 185
BLAST of CN186273 vs. ExPASy Swiss-Prot
Match: RLA0_PYRAB (Acidic ribosomal protein P0 homolog OS=Pyrococcus abyssi GN=rplP0 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11 Identity = 50/184 (27.17%), Postives = 85/184 (46.20%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPL 727 A AE K +L L++ Y I + ++ + L +RR +R + +L + +NT+++ I+ A++ G L + G++ T + APA+ G V P DVV+P G T L P Q + IP +I +G V I +++ G+ + A +L LGI+PL Sbjct: 2 AHVAEWKKKEVEELANLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAQELGKPELEKLAEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVIPAGPTPLAPGPIVGQMQAMGIPARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPL 185 The following BLAST results are available for this feature:
BLAST of CN186273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186273 ID=CN186273; Name=CN186273; organism=Citrus sinensis; type=EST; length=735bpback to top |