CX674935

Overview
NameCX674935
Unique NameCX674935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP_NOSCE (Aquaporin OS=Nosema ceranae (strain BRL01) GN=AQP PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 55/223 (24.66%), Postives = 90/223 (40.36%), Query Frame = 2 
Query:  194 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLG-AICGVGLVKAFMKHEYNSLG-GGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-----TDPKRSARDSHVP---------VLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            ++ I EF A+ +F +    ++IG  +   + G + ++ +  A  G+  +  +C   I+  H NPA+TF     R++     +  ++ Q  G  I G+  V        N L       VA   ++G   G E   T +LVY  F+      T PK    D   P         + APL IGF +    L  I  +G   NP       ++      WD  W++
Sbjct:   10 QSYIGEFFASFIFGFAVYTSIIGSAQTGQSAGPI-IVALTIALSGVAIIYSFCD--ITVAHFNPAITFSAMCFRRLPFFGGIFIIIFQVAGFIIAGLASVAVLPGKYKNKLEIARPKRVADNVSRGRIFGTEFFLTAILVYVAFAVGVNPYTPPKDEHGDQLDPDEGLTEGRKITAPLAIGFTLGFCALLGIASSGGAFNPGIVLSPMILTGT---WDFWWVY 226
The following BLAST results are available for this feature:
BLAST of CX674935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
AQP_NOSCE6.383e-1124.66Aquaporin OS=Nosema ceranae (strain BRL01) GN=AQP ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9E12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9E12-I23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674935 ID=CX674935; Name=CX674935; organism=Citrus sinensis; type=EST; length=816bp
CTTTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGA
CAAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGC
ACCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTC
TCATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCC
ACTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCT
TTTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACT
GCACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGG
CTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGT
GGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCA
TGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCT
GGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGT
GCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTG
ACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTC
ATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGC
TAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGGCTGGGATG
ACCATTGGATCTTCTG
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