CX674935

Overview
NameCX674935
Unique NameCX674935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.009e-34
Identity = 87/211 (41.23%), Postives = 125/211 (59.24%), Query Frame = 2
Query:  185 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            +F++A+ AEF+A L+F+ +SV + I      +    V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    + +GG G  TV      G  L  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W++HWI+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 9.154e-34
Identity = 87/211 (41.23%), Postives = 125/211 (59.24%), Query Frame = 2
Query:  185 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            +F++A+ AEF+ATL+F+ + V + I      +    V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y++AQCLGAI G G++  ++    + +GG G  TV      G  L  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W +HWI+
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIY 233          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.561e-33
Identity = 86/211 (40.76%), Postives = 126/211 (59.72%), Query Frame = 2
Query:  185 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            +F++A+ AEF+A L+F+ +S+ + I    + +    V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    + +GG G  TV      G  L  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W++HWI+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.726e-32
Identity = 87/214 (40.65%), Postives = 126/214 (58.88%), Query Frame = 2
Query:  185 SFYRALIAEFVATLLFLYVSVATVI---GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            +F++A+ AEF+A L+F+ +S+ + I   G +K       V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    + +GG G   V      G  L  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W++HWI+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLP----VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.945e-32
Identity = 86/214 (40.19%), Postives = 127/214 (59.35%), Query Frame = 2
Query:  185 SFYRALIAEFVATLLFLYVSVATVI---GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            +F++A+ AEF+A L+F+ +S+ + I   G +K       V ++ I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ ++V Y+ AQCLGAI G G++  ++    + +GG G  TV    + G  L  E+I TF LV+T+F++ D KR    + V     L IG +V + HL  I  TG  +NPARSFG AVI  N   W++HWI+
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPLP----VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.368e-29
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 2
Query:  194 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            RA +AEF++TLLF++  V + I + K +   A    GL+ IA   G  +FV V   A ISGGH+NPAVTFGL +  ++++I  V Y +AQ LG+     L    +K+    L    ++VA+G      +  EII TF LVYTV+ +A DPK+ +    +  +APL IG  V    LA  P +G  +NPARSFG AV   +  G   HW++
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFL----LKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSG---HWVY 217          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.333e-29
Identity = 83/218 (38.07%), Postives = 123/218 (56.42%), Query Frame = 2
Query:  164 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            M EL+  SF+RA++AEF+ +LL+  + +   +       A G  G+LG A AFG     LV     +SGGHINPA+T    LA ++SL RA+ Y++AQ LGA+ G G++          +LG  A   + G  +G+ +  E++ T   +  VF++ D +   R    P  A LP+GF++ + HL  IP TG G+NPARSF  AVI  N   + +HW+F
Sbjct:    1 MRELRSSSFWRAILAEFLGSLLYTLLGLGASLRW-----APGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVV--ELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRN---FTNHWVF 204          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.333e-29
Identity = 82/212 (38.68%), Postives = 120/212 (56.60%), Query Frame = 2
Query:  185 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            +F +A+ AEF+ATL+F++  +A+ +             +L IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI G G++        N+ G    N++ +    G A+  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N       HW+F
Sbjct:    9 AFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG--NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVF 206          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.047e-29
Identity = 74/213 (34.74%), Postives = 114/213 (53.52%), Query Frame = 2
Query:  176 KLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            K+W   R L+AE + T   + + V +  G  + S +     +  IA+ FG  +  L      ISG HINPAVT G  +  ++S+I++V Y+  QC+GAI G  ++K  +    + L  G ++ +S    G A+  E + TF+LV  V   +DP R    + +   APL +G ++   HL  I +TG  +NPARSFG AV+ N    W DHW++
Sbjct:   21 KIW---RQLMAELIGTFFLVVIGVGSCTGGSEWSPS-----IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVY 218          
BLAST of CX674935 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.980e-29
Identity = 82/213 (38.50%), Postives = 122/213 (57.28%), Query Frame = 2
Query:  194 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGV--GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG---GANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKGWDDHWIF 814
            +A +AEF++ L+F++    + +   K +D  G    GL+  + A    +FV V   A ISGGH+NPAVTFG F+   +SL++AV Y VAQ LG++    L+K        + GG   GA ++++G    +A+  EI+ TF LVYTV+ +A DPK+      + V+AP+ IGF V    LA     G  +NPA SFG AV+      WD+HW++
Sbjct:   21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKI-------ATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVY 219          
The following BLAST results are available for this feature:
BLAST of CX674935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
AQP4_RAT7.009e-3441.23Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_MOUSE9.154e-3441.23Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME1.561e-3340.76Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_HUMAN1.726e-3240.65Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_BOVIN2.945e-3240.19Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
TIP21_ARATH1.368e-2940.00Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
MIP_CHICK2.333e-2938.07Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_PIG2.333e-2938.68Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_HAEIX3.047e-2934.74Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
TIP12_ORYSJ3.980e-2938.50Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_9E12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9E12-I23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674935 ID=CX674935; Name=CX674935; organism=Citrus sinensis; type=EST; length=816bp
CTTTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGA
CAAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGC
ACCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTC
TCATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCC
ACTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCT
TTTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACT
GCACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGG
CTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGT
GGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCA
TGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCT
GGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGT
GCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTG
ACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTC
ATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGC
TAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGGCTGGGATG
ACCATTGGATCTTCTG
back to top