CN186268

Overview
NameCN186268
Unique NameCN186268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_AZOSE (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain EbN1) GN=metK PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.423e-45
Identity = 92/167 (55.09%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKPV+P   +  +  + +NP+GRFVIGGPHGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC VQV+YAIGV  P+S+ ++++GTG+I D++I+++V+  FD RP  +   L+L R   G   KTAAYGHFGRD+P+FTWE
Sbjct:  211 IKPVLPSALMQGEVRYLINPTGRFVIGGPHGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRWVAKNIVAAGLADRCEVQVAYAIGVARPVSMMIETFGTGRITDEKIVELVQRHFDLRPKAIIQELNLLRPIYG---KTAAYGHFGRDEPEFTWE 374          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.423e-45
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = -1
Query:  318 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 836
            IK VIP   +D+KTI+HLNP G F+IGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKS+V +GL RRC+VQVSYAIGV +PLSV V S+GT  + + E+LKIV ++FD RPGM+  +LDLK+     +  TA  GHFG +  +F WE  + L+
Sbjct:  215 IKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKSGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKK---PIYEPTAENGHFGHN--EFPWEQPRHLQ 382          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_THESQ (S-adenosylmethionine synthetase OS=Thermotoga sp. (strain RQ2) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.858e-45
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I PVIPE+Y D+K    +NP+GRFV+GGP  D GLTGRKII+DTY            GKDPTKVDRS  Y+ R  AK++VA GLA + ++Q+SYAIGV +P+S+ +D+YGT K+ + ++LK++ E FDFRPG +   L+L R     + KTAAYGHFGR++ +FTWE
Sbjct:  218 INPVIPEQYRDDKMKILVNPTGRFVLGGPMADTGLTGRKIIVDTYGGWVPHGGGAFSGKDPTKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSIMIDTYGTAKVDEDKLLKVITELFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_THEP1 (S-adenosylmethionine synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.858e-45
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I PVIPE+Y D+K    +NP+GRFV+GGP  D GLTGRKII+DTY            GKDPTKVDRS  Y+ R  AK++VA GLA + ++Q+SYAIGV +P+S+ +D+YGT K+ + ++LK++ E FDFRPG +   L+L R     + KTAAYGHFGR++ +FTWE
Sbjct:  218 INPVIPEQYRDDKMKILVNPTGRFVLGGPMADTGLTGRKIIVDTYGGWVPHGGGAFSGKDPTKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSIMIDTYGTAKVDEDKLLKVITELFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_THEMA (S-adenosylmethionine synthetase OS=Thermotoga maritima GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.858e-45
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I PVIPE+Y D+K    +NP+GRFV+GGP  D GLTGRKII+DTY            GKDPTKVDRS  Y+ R  AK++VA GLA + ++Q+SYAIGV +P+S+ +D+YGT K+ + ++LK++ E FDFRPG +   L+L R     + KTAAYGHFGR++ +FTWE
Sbjct:  218 INPVIPEQYRDDKMKILVNPTGRFVLGGPMADTGLTGRKIIVDTYGGWVPHGGGAFSGKDPTKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSIMIDTYGTAKVDEDKLLKVITELFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_NITEU (S-adenosylmethionine synthetase OS=Nitrosomonas europaea GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.858e-45
Identity = 92/167 (55.09%), Postives = 116/167 (69.46%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKPV+P + L     + +NP+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLAR+C VQV+YAIGV +P+S+ V ++GTGKIPD ++ +++   FD RP  +   LDL R   G   KTAAYGHFGR++P FTWE
Sbjct:  210 IKPVLPAEMLSNHIQYLINPTGRFVVGGPMGDCGLTGRKIIVDTYGGTAHHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMVQTFGTGKIPDGKLAELIARHFDLRPRAIIHELDLLRPIYG---KTAAYGHFGREEPSFTWE 373          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.858e-45
Identity = 90/167 (53.89%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKPV+P++ +  +  + +NP+GRFVIGGPHGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I+ +++  FD RP  +   LDL R     + +TAAYGHFGRD+P+FTWE
Sbjct:  211 IKPVLPKELMQGEVRYLINPTGRFVIGGPHGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKIADDKIVDLIRAHFDLRPKAIIQTLDLLR---PIYSRTAAYGHFGRDEPEFTWE 374          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_MAGSM (S-adenosylmethionine synthetase OS=Magnetococcus sp. (strain MC-1) GN=metK PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.427e-45
Identity = 93/167 (55.69%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I+ VIP + L E T + +NP+GRFVIGGP GDAG+TGRKII+DTY            GKDP+KVDRS AY+ R  AK+IVA GLA +C +QV+YAIGV +P+SV VD++GTGK+ D+ I ++VK+ FD RP  +   LDL R     + K+AAYGHFGR+ P+FTWE
Sbjct:  212 IRAVIPAELLHEGTQYFINPTGRFVIGGPVGDAGVTGRKIIVDTYGGMGSHGGGAFSGKDPSKVDRSSAYMGRYVAKNIVAAGLAEKCEIQVAYAIGVSQPMSVMVDTFGTGKLDDEAITELVKKHFDLRPKAIVQQLDLLR---PIYKKSAAYGHFGRELPEFTWE 375          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_DICNV (S-adenosylmethionine synthetase OS=Dichelobacter nodosus (strain VCS1703A) GN=metK PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.427e-45
Identity = 92/167 (55.09%), Postives = 116/167 (69.46%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I P++P K++D+KT FH+NP+G+FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA GLA RC VQ+SYAIG+ EP S+ V+++GTG I D EI++ V+  FD  P  +   LDL R     + KTA YGHFGR+ P FTWE
Sbjct:  208 IAPIVPSKWIDKKTRFHINPTGKFVIGGPLGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLATRCEVQLSYAIGIAEPTSIMVNTFGTGTIDDAEIVRRVQAVFDLTPYGIIEMLDLVR---PIYQKTAVYGHFGRELPQFTWE 371          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.427e-45
Identity = 89/167 (53.29%), Postives = 121/167 (72.46%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I+ V+PE+ +DE+T + +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA GLA +C VQ++YAIGV +P+S+ +D++GTG++ +  ++++V+E FD RP  +   LDL+R     + +TAAYGHFGR D +  WE
Sbjct:  224 IRSVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAKPVSISIDTFGTGQVSEARLVELVREHFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVELPWE 387          
The following BLAST results are available for this feature:
BLAST of CN186268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_AZOSE1.423e-4555.09S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK3_CAEEL1.423e-4556.07Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_THESQ1.858e-4553.29S-adenosylmethionine synthetase OS=Thermotoga sp. ... [more]
METK_THEP11.858e-4553.29S-adenosylmethionine synthetase OS=Thermotoga petr... [more]
METK_THEMA1.858e-4553.29S-adenosylmethionine synthetase OS=Thermotoga mari... [more]
METK_NITEU1.858e-4555.09S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_AZOSB1.858e-4553.89S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_MAGSM2.427e-4555.69S-adenosylmethionine synthetase OS=Magnetococcus s... [more]
METK_DICNV2.427e-4555.09S-adenosylmethionine synthetase OS=Dichelobacter n... [more]
METK_BACHD2.427e-4553.29S-adenosylmethionine synthetase OS=Bacillus halodu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186268 ID=CN186268; Name=CN186268; organism=Citrus sinensis; type=EST; length=836bp
TTTTTTTTTTTTTAGCAAAAGGAAGAATTTTACTAATTCCAGGCACCTTT
TTGAGCAAAATTCTCAATCGATATCACTACACAACAGTGGTGACATGGTA
CATTAAACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAA
TTGAATGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTAT
TACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAG
AAGCAAACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAA
GCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTC
TGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGC
CATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTG
AAATCAAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTT
GCCGGTTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAA
TGGCATAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACA
ATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTT
AGTAGGGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCCAGCCAC
CATAAGTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGA
GGCCCACCAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTT
CTCATCAAGGTACTTCTCGGGGATGACAGGCTTAAT
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