CN186268

Overview
NameCN186268
Unique NameCN186268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_YERPA (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 89/167 (53.29%), Postives = 113/167 (67.66%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  208 IKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_YERP3 (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 89/167 (53.29%), Postives = 113/167 (67.66%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  208 IKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_STRU0 (S-adenosylmethionine synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 86/167 (51.50%), Postives = 113/167 (67.66%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IK VIP  ++D+ T + +NP+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK+IVA GLA++  VQ++YAIGV +P+SV +D++GT  + + +I K V++ FD RP  +   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  219 IKEVIPTSFIDDNTKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAQPVSVRIDTFGTSTVSETDIEKAVRQLFDLRPAGIIKMLDLKR---PIYKQTAAYGHMGRTDIDLPWE 382          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_STRMU (S-adenosylmethionine synthetase OS=Streptococcus mutans GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 88/167 (52.69%), Postives = 114/167 (68.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IK VIP +YLD KT + +NP+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK+IVA GLA++  VQ++YAIGV +P+SV VD++GT  + + ++ + V++ FD RP  +   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  220 IKAVIPAEYLDAKTKYLINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAQPVSVRVDTFGTALVAESKLEQAVRQIFDLRPAGIIKMLDLKR---PIYRQTAAYGHVGRTDIDLPWE 383          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_SORC5 (S-adenosylmethionine synthetase OS=Sorangium cellulosum (strain So ce56) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 85/167 (50.90%), Postives = 114/167 (68.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I+  IP K +D+ T  ++NP+GRFV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS  Y  R  AK++VA+ LA RC VQ++YAIGV +P+ V V+++GTG++ +  + K + ++FD RP  +   LDL +     + KTAAYGHFGRD  +FTWE
Sbjct:  210 IEKCIPAKLMDKSTKIYVNPTGRFVVGGPFGDAGLTGRKIIVDTYGGMGRHGGGAFSGKDPTKVDRSACYYARYVAKNVVASKLAARCEVQIAYAIGVAQPVGVHVNTFGTGRVGEDVLEKYIMQNFDMRPKAIIEQLDLLK---PIYRKTAAYGHFGRD--EFTWE 371          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_PSYIN (S-adenosylmethionine synthetase OS=Psychromonas ingrahamii (strain 37) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 88/169 (52.07%), Postives = 116/169 (68.64%), Query Frame = -1
Query:  330 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 836
            IKPV+P ++L E+T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+    I+++++E FD RP  +   L+L +     +  TAAYGHFGR+  +F WE +
Sbjct:  208 IKPVLPAEWLSERTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGSARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTEKVKKDLIIQLIREHFDLRPYGLIEMLNLIQ---PIYQSTAAYGHFGRN--EFPWEAL 371          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 89/178 (50.00%), Postives = 116/178 (65.17%), Query Frame = -1
Query:  309 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 836
            +K  +P + L + T FH+NP+G+FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV +P S+ ++++GTGKI D +I+ +V+  FD RP  +T  LDL    +  +  TAAYGHFGRD  + T   +      WEK
Sbjct:  209 VKHTLPAELLHKDTQFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAEKCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIDLVRAHFDLRPYAITNMLDLL---HPMYRATAAYGHFGRDPYEMTVGGKTFTAFPWEK 383          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 88/164 (53.66%), Postives = 110/164 (67.07%), Query Frame = -1
Query:  336 VIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 827
            VI   +LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA GLA++  VQV+YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  +   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  225 VIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_HELHP (S-adenosylmethionine synthetase OS=Helicobacter hepaticus GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 84/167 (50.30%), Postives = 116/167 (69.46%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            ++ V+P++YL++   + +NP+G+FVIGGP GDAGLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+G+  + IVQV+YAIGV EP+S+ VD+ GTGK+ D ++ + VK  F   P  +  +LDL R     + KTAAYGHFGR+  +F+WE
Sbjct:  208 VQKVLPQEYLNDNIRYFVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPSKVDRSAAYAARYVAKNLVASGVCDKAIVQVAYAIGVVEPVSILVDTQGTGKVEDSKLTECVKAVFRLTPKGIIESLDLLR---PIYRKTAAYGHFGRELNEFSWE 371          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_ANAVT (S-adenosylmethionine synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 87/161 (54.04%), Postives = 114/161 (70.81%), Query Frame = -1
Query:  336 DEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPG--MMTINL-DLKRGGNGRFLK-TAAYGHFGRDDPDFTWE 806
            D++T F +NP+G+FVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA +C VQ+SYAIGV  P+S+F+D++GTGK+ D+ +L +VK++F+ RP   + + NL +L     GRF +  AAYGH GR+D D  WE
Sbjct:  239 DQETRFLVNPTGKFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAEKCEVQLSYAIGVARPVSIFLDTFGTGKVDDEILLGLVKDNFELRPAGIIHSFNLRNLPSERGGRFYQDVAAYGHLGRNDLDLPWE 399          
The following BLAST results are available for this feature:
BLAST of CN186268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_YERPA8.078e-4153.29S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERP38.078e-4153.29S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_STRU08.078e-4151.50S-adenosylmethionine synthetase OS=Streptococcus u... [more]
METK_STRMU8.078e-4152.69S-adenosylmethionine synthetase OS=Streptococcus m... [more]
METK_SORC58.078e-4150.90S-adenosylmethionine synthetase OS=Sorangium cellu... [more]
METK_PSYIN8.078e-4152.07S-adenosylmethionine synthetase OS=Psychromonas in... [more]
METK_MARAV8.078e-4150.00S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_LISMO8.078e-4153.66S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_HELHP8.078e-4150.30S-adenosylmethionine synthetase OS=Helicobacter he... [more]
METK_ANAVT8.078e-4154.04S-adenosylmethionine synthetase OS=Anabaena variab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186268 ID=CN186268; Name=CN186268; organism=Citrus sinensis; type=EST; length=836bp
TTTTTTTTTTTTTAGCAAAAGGAAGAATTTTACTAATTCCAGGCACCTTT
TTGAGCAAAATTCTCAATCGATATCACTACACAACAGTGGTGACATGGTA
CATTAAACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAA
TTGAATGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTAT
TACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAG
AAGCAAACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAA
GCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTC
TGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGC
CATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTG
AAATCAAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTT
GCCGGTTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAA
TGGCATAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACA
ATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTT
AGTAGGGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCCAGCCAC
CATAAGTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGA
GGCCCACCAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTT
CTCATCAAGGTACTTCTCGGGGATGACAGGCTTAAT
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