CN186268

Overview
NameCN186268
Unique NameCN186268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48
Identity = 97/167 (58.08%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKP+IPE  LD+ T  ++NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS  Y  R  AK+IVA GLA++C VQ+SYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +LDL+R     + K AAYGHFGR+D D  WE
Sbjct:  218 IKPIIPEGMLDKNTKIYINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGREDLDLPWE 381          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47
Identity = 95/167 (56.89%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  209 IKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47
Identity = 95/167 (56.89%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  209 IKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47
Identity = 95/167 (56.89%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  209 IKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47
Identity = 95/167 (56.89%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKP++P  +LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  209 IKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_TERTT (S-adenosylmethionine synthetase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47
Identity = 96/168 (57.14%), Postives = 121/168 (72.02%), Query Frame = -1
Query:  333 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEV 836
            IKPV+P ++L   T +H+NP+G+F+IGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI D +I+++VKE FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE+
Sbjct:  209 IKPVLPAEWLHSNTKYHINPTGQFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVNTFGTGKIDDGKIVELVKEHFDLRPRGLIEMLDLMR---PIYRKTAAYGHFGRELPEFTWEI 373          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47
Identity = 93/167 (55.69%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IK V+P   LDE T F++NP+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS +Y+ R  AK++VA  LAR+C VQ++YAIGV EP+S+ V+++GTG +P  EI +IV+E FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  212 IKKVVPADMLDENTKFYVNPTGRFVVGGPQGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSASYMARYVAKNVVAAKLARKCEVQIAYAIGVAEPVSIMVNTFGTGVLPSNEIARIVREEFDMRPAAIIETLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47
Identity = 97/167 (58.08%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            IKPVIPE  LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS  Y  R  AK+IVA+GLA++C VQVSYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +L+L+R     + + AAYGHFGR+D D  WE
Sbjct:  218 IKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVFDLRPAAIIRDLNLRR---PIYKQVAAYGHFGREDLDLPWE 381          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47
Identity = 98/172 (56.98%), Postives = 121/172 (70.35%), Query Frame = -1
Query:  321 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPL 836
            IK V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY            GKD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EPLS+ + +YGT    ++E+L++V ++FD RPG++  +LDLK+     + KTA YGHFGR   +F WEV K L
Sbjct:  228 IKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSNKTERELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 394          
BLAST of CN186268 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.422e-47
Identity = 93/167 (55.69%), Postives = 122/167 (73.05%), Query Frame = -1
Query:  336 IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 836
            I PVIP + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+G+AR+C VQ++YAIGV +P+SV VD++GT  IP+++I ++V + FD RP  +   L+L+R     + KTAAYGHFGRDD +F+WE
Sbjct:  219 IIPVIPRELLDEGTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
The following BLAST results are available for this feature:
BLAST of CN186268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CALS86.823e-4858.08S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_COXBU1.520e-4756.89S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR1.520e-4756.89S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB21.520e-4756.89S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB11.520e-4756.89S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_TERTT2.593e-4757.14S-adenosylmethionine synthetase OS=Teredinibacter ... [more]
METK_PELCD2.593e-4755.69S-adenosylmethionine synthetase OS=Pelobacter carb... [more]
METK_ANATD2.593e-4758.08S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK1_MOUSE2.593e-4756.98S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_CLOCE4.422e-4755.69S-adenosylmethionine synthetase OS=Clostridium cel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186268 ID=CN186268; Name=CN186268; organism=Citrus sinensis; type=EST; length=836bp
TTTTTTTTTTTTTAGCAAAAGGAAGAATTTTACTAATTCCAGGCACCTTT
TTGAGCAAAATTCTCAATCGATATCACTACACAACAGTGGTGACATGGTA
CATTAAACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAA
TTGAATGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTAT
TACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAG
AAGCAAACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAA
GCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTC
TGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGC
CATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTG
AAATCAAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTT
GCCGGTTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAA
TGGCATAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACA
ATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTT
AGTAGGGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCCAGCCAC
CATAAGTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGA
GGCCCACCAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTT
CTCATCAAGGTACTTCTCGGGGATGACAGGCTTAAT
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