CN186264

Overview
NameCN186264
Unique NameCN186264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19
Identity = 43/108 (39.81%), Postives = 70/108 (64.81%), Query Frame = -1
Query:  442 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHP 762
            E DL F  N  A++YI+ LP  P  P ++L+ + +P+AIDL+ +ML FDP +RI+V +AL H Y++ L+DP+  P  Q P   + +++   EE I+EM+ +E +  +P
Sbjct:  260 ESDLGFTHNEDAKRYIRQLPNFPRQPLAKLFSHVNPMAIDLVDRMLTFDPNRRITVEQALNHQYLAKLHDPNDEPICQKPFSFEFEQQPLDEEQIKEMIYQEAIALNP 367          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = -1
Query:  439 ARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHPE 729
            A++YI+ LP  P   F+  +PN  PLAIDL++KML FDP +RISV EAL HPY+S  +D +  P    P + D+DE    EE  RE++  E L ++PE
Sbjct:  292 AKRYIRQLPTLPRQSFTEKFPNVPPLAIDLVEKMLTFDPKQRISVKEALAHPYLSSFHDITDEPECSEPFNFDLDEHPFSEEQFRELIYCEALAFNPE 389          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MK03_RAT (Mitogen-activated protein kinase 3 OS=Rattus norvegicus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 95.1301 bits (235), Expect = 4.439e-19
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = -1
Query:  436 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHPEA 771
            S  +EDL  I N KAR Y++SLP      +++L+P +   A+DLL +ML F+P KRI+V EAL HPY+   YDP+  P A+ P   DM+ ++  +E ++E++ +E   + P A
Sbjct:  264 SPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFDMELDDLPKERLKELIFQETARFQPGA 376          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MK03_MOUSE (Mitogen-activated protein kinase 3 OS=Mus musculus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 95.1301 bits (235), Expect = 4.439e-19
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = -1
Query:  436 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHPEA 771
            S  +EDL  I N KAR Y++SLP      +++L+P +   A+DLL +ML F+P KRI+V EAL HPY+   YDP+  P A+ P   DM+ ++  +E ++E++ +E   + P A
Sbjct:  264 SPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFDMELDDLPKERLKELIFQETARFQPGA 376          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 46/109 (42.20%), Postives = 70/109 (64.22%), Query Frame = -1
Query:  439 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHPE 762
            E+DL F+ N  A++YI+ LP      F   +P+ HP AIDL++KML FDP KRI+V +AL HPY++ L+D S  P    P   D ++ +  EE ++E++ +E L ++PE
Sbjct:  277 EDDLGFL-NENAKRYIRQLPPYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPE 384          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18
Identity = 45/109 (41.28%), Postives = 70/109 (64.22%), Query Frame = -1
Query:  439 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHPE 762
            E DL+F+ N  AR+YI+ LP      F   +P+ HPLAIDL++KML FDP +RI+V  AL HPY++ L+D S  P    P   D ++ +  EE +++++ +E L ++P+
Sbjct:  289 EADLDFV-NENARRYIRQLPRHARQSFPEKFPHVHPLAIDLVEKMLTFDPRQRITVEGALAHPYLASLHDISDEPVCSSPFSFDFEQHALSEEQMKDLIYQEGLAFNPD 396          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = -1
Query:  529 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQ 762
            + DL  I++P+AR+YIKSLP  P  P  +++P  +P  IDLLQ+MLVFDP KRI+  EAL+HPY+   +DP+  P  +
Sbjct:  245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGE 322          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.877e-18
Identity = 43/109 (39.45%), Postives = 72/109 (66.06%), Query Frame = -1
Query:  439 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHPE 762
            +  L F+ +  AR+Y++ LP  P   F+  +PN    A+DLL+KMLVFDP++RI+V EAL HPY++PL+D +  P    P + D ++ +  EE I+E++ +E + ++P+
Sbjct:  265 DSSLGFLRSDNARRYVRQLPQYPRQNFAARFPNMSAGAVDLLEKMLVFDPSRRITVDEALCHPYLAPLHDINEEPVCVRPFNFDFEQPTLTEENIKELIYRETVKFNPQ 373          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MK03_HUMAN (Mitogen-activated protein kinase 3 OS=Homo sapiens GN=MAPK3 PE=1 SV=4)

HSP 1 Score: 92.4337 bits (228), Expect = 2.877e-18
Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = -1
Query:  427 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHPEAITA 771
            S  +EDL  I N KAR Y++SLP      +++L+P +   A+DLL +ML F+P KRI+V EAL HPY+   YDP+  P A+ P    M+ ++  +E ++E++ +E   + P  + A
Sbjct:  263 SPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQPGVLEA 378          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.908e-18
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = -1
Query:  439 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHPE 762
            E DL F+ N  A++YI+ LP      F   +P+ HP AIDL++KML FDP +RI+V  AL HPY++ L+D S  P    P   D ++ +  EE ++E++ +E L ++PE
Sbjct:  284 EADLGFL-NENAKRYIRQLPLYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRQRITVENALAHPYLTSLHDISDEPVCTTPFSFDFEQHALTEEQMKELIYREALAFNPE 391          
The following BLAST results are available for this feature:
BLAST of CN186264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
MPK3_ARATH3.399e-1939.81Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK10_ARATH3.399e-1946.94Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
MK03_RAT4.439e-1940.71Mitogen-activated protein kinase 3 OS=Rattus norve... [more]
MK03_MOUSE4.439e-1940.71Mitogen-activated protein kinase 3 OS=Mus musculus... [more]
MMK1_MEDSA5.797e-1942.20Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MPK1_ORYSJ1.687e-1841.28Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
FUS3_YEAST1.687e-1850.00Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]
MPK4_ARATH2.877e-1839.45Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MK03_HUMAN2.877e-1838.79Mitogen-activated protein kinase 3 OS=Homo sapiens... [more]
MAPK_PEA4.908e-1841.28Mitogen-activated protein kinase homolog D5 OS=Pis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186264 ID=CN186264; Name=CN186264; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTCATTGTTAACTTACTCTCATGTATCCCCATTTTA
ATTTACAAAAAATAAGTTCATACACAAACAGCACCCCTCTTATATACAAA
TTAAACAGGGCCACCTACGGTACAGTACAGCGCTCAAACTCATAACCATA
CTTTAAAACAAAACAAAAAAAACAAAACGAAACAAAACAAAACAAAATTA
TTAGCAGCCCTACTAATGACTAATGCCATGTTTCTTCTGGATTATTAAAA
AACAGGAAACAGAATGCAAATAAATAACTGTCATCAGCTGAAGTAGCTTA
CTAAGGCGAAGGAATTCTTCGTTGATTGCACGAGCTAGCCAGCAAGCAAG
CAAACCCAAACAGTTCTCCCCATTCCTCACTGTTAAGCCAAGGAAGACAA
GATTAGGAGGAGCACACCTCAGTGTTGGCTGTAATTGCCTCGGGGTGGTA
ATGCAGCATTTCCTTCAACATCATTTCCCTTATCATCTCTTCCCCTGATT
CCTCATCCATATCAAGATCAATAGGCACCTGAGCTGGAGGGTTAGAGCTA
GGATCATACAGTGGGGACATGTAAGGGTGTTGGAGTGCTTCAGTAACACT
AATCCTCTTTGTAGGGTCAAAAACAAGCATCTTTTGCAGCAGATCAATAG
CTAAAGGATGCGCATTCGGGTAAAGACGGGAAAAGGGAGTCCCAGGTGTA
TACGGAAGCGATTTAATGTATTTCCTCGCCTTTGGGTTGTCAATAAACTC
AAGATCCTCCTCCCTTCGGCT
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