CN186257

Overview
NameCN186257
Unique NameCN186257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.819e-48
Identity = 101/182 (55.49%), Postives = 126/182 (69.23%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKV--TPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DG HD+  C  VTE+VLAA YKAL+D HV LEG+LLKPNMVT G +A K+  +P+ +A  TV AL+RT+P+AVP + F SGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ES  + +  Y
Sbjct:  184 VPIVEPEILPDGDHDLKTCQYVTEKVLAATYKALSDHHVYLEGSLLKPNMVTAG-QASKIRCSPQEVAMATVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 8.819e-48
Identity = 99/160 (61.88%), Postives = 112/160 (70.00%), Query Frame = -3
Query:  233 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTY 709
            VPIVEPE++ DG HD+  C  VTE+VLAA YKALND HV LEGTLLKPNMVT G    K  TPE +A  TV AL RT+PAAVP + F SGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  AN +A  G Y
Sbjct:  184 VPIVEPEVIPDGSHDMEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQY 343          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.566e-47
Identity = 103/181 (56.91%), Postives = 122/181 (67.40%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DG HD+ +C  VTE+VLAACYKAL+D HV LEGTLLKPNMVT G   P K + + IA  TV AL+RT+P AV  V F SGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +S +V +  Y
Sbjct:  184 VPIVEPEILPDGDHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.716e-47
Identity = 102/174 (58.62%), Postives = 119/174 (68.39%), Query Frame = -3
Query:  191 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESF 709
            VPIVEPE+L DG HD+     VTE+VL+  YKAL D HV LEGTLLKPNMVT G    K  + E  A  TV ALQRT+P AVP VVF SGGQSE +AT NLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G    F
Sbjct:  184 VPIVEPEVLPDGDHDLETAQRVTEQVLSFVYKALADHHVYLEGTLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLF 357          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.716e-47
Identity = 101/182 (55.49%), Postives = 123/182 (67.58%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPG--FEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DG H + +   +TE VL+  Y ALN+ HV LEGTLLKPNMVT G  F   K +   I   TV ALQR +P+AVP VVF SGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + N  A++G Y GDA     A++S  V +  Y
Sbjct:  185 VPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.466e-47
Identity = 101/181 (55.80%), Postives = 120/181 (66.30%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DG HD+ +C  VTE+VLAACYKAL+D HV LEGTLLKPNMVT G   P K + E IA  TV AL+RT+P AV  V F SGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +S +V +  Y
Sbjct:  184 VPIVEPEILPDGEHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLLKPNMVTAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 103/181 (56.91%), Postives = 124/181 (68.51%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFE-APKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DGPH I  CA VT++VL+  +KAL +  VLLEG LLKPNMVT G+E   K T + +   TVR L+RT+P A+P VVF SGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +AN  AT G YKG A  GE A  S + K   Y
Sbjct:  191 VPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINAL-GPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 103/181 (56.91%), Postives = 124/181 (68.51%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFE-APKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DGPH I  CA VT++VL+  +KAL +  VLLEG LLKPNMVT G+E   K T + +   TVR L+RT+P A+P VVF SGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +AN  AT G YKG A  GE A  S + K   Y
Sbjct:  191 VPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINAL-GPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 98/181 (54.14%), Postives = 117/181 (64.64%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPE+L DG HD+  C  V+E+VLAA YKALND HV LEGTLLKPNM+T G    K  TPE +A  TV AL RT+PAAVP++ F SGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +S       Y
Sbjct:  184 VPIVEPEVLPDGDHDLEHCQYVSEKVLAAVYKALNDHHVYLEGTLLKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45
Identity = 95/160 (59.38%), Postives = 113/160 (70.62%), Query Frame = -3
Query:  233 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTY 709
            VPIVEPEIL DG H++ +C  VTERVLAA YKA+ D HV LEGTLLKPNMVTPG   P K + E +A  TV AL+RT+P AV  V F SGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + N  A+ G Y
Sbjct:  184 VPIVEPEILPDGDHNLKRCQFVTERVLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKY 343          
The following BLAST results are available for this feature:
BLAST of CN186257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF2_LAMJA8.819e-4855.49Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_SHEEP8.819e-4861.88Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOC_CARAU2.566e-4756.91Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALF_ECHMU5.716e-4758.62Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALF1_CAEEL5.716e-4755.49Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDCB_DANRE7.466e-4755.80Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALF_PLAFA9.750e-4756.91Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF79.750e-4756.91Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALDOB_RAT1.273e-4654.14Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALDCA_DANRE9.126e-4559.38Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002J22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186257 ID=CN186257; Name=CN186257; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTTTTTCCCATACCGAAGTTCCCAAGCTTTTTTATTGCT
CCACCTAATACGAAAAAGCCCTAAAACTATGAATGAGAATGGGCCAACCT
AATGTTCATACCGCCTTTTACTCTCATAAAGTTCATAAAGCACAACACCC
AAAGCTTCAACTGTGCTTAGTATTTGGAGTCCTTGACATGGAAAGACTCT
GCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAGGGTAGC
CTCAAAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCTTCTGCA
CATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGAAGTGCA
CGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAGCTGGTT
CATGGCATTAAGGTTGGGGGTAGCCTCCTCCTCACTCTGCCCACCAGAAA
AGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGGGCCCGG
ACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGAGCTTCAAATCC
AGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAGAAGGACATGGG
GGTCATTCAAAGCCTTGTAGCATGCAGCAAGAACACGCTCGGTCACATCA
GCACACTTGTTGATGTCATGGGGACCGTCAACAAGGATCTCAGGTTCAAC
AATGGGAACAGGCC
back to top