CN186257

Overview
NameCN186257
Unique NameCN186257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1585..2297. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 78/163 (47.85%), Postives = 107/163 (65.64%), Query Frame = -3
Query:  227 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANFEATLGTYKG 709
            VP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + E +AE TV  L+ T+PA +P +VF SGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  173 VPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 82/181 (45.30%), Postives = 110/181 (60.77%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPE+L+DG HDI++C +V E + A  +K + D  V+L+G LLKP MVTPG +   K  P  +AE+T++ L    P  VP ++F SGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KAN +A  G Y    + G+ AA+  + K   Y
Sbjct:  197 VPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAP-PVPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 76/163 (46.63%), Postives = 109/163 (66.87%), Query Frame = -3
Query:  227 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANFEATLGTYKG 709
            VP+VEPE+++DG HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG +   + + + +AE TV  L+ T+PA +P +VF SGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  173 VPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 77/163 (47.24%), Postives = 107/163 (65.64%), Query Frame = -3
Query:  227 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANFEATLGTYKG 709
            VP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + E +AE TV  L+ T+PA +P +VF SGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  173 VPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.578e-31
Identity = 71/137 (51.82%), Postives = 88/137 (64.23%), Query Frame = -3
Query:  170 LLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 577
            LLKPNMVTPG   P K +PE IA  TV AL+RT+P AVP V F SGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +S +V +  Y
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 3.722e-30
Identity = 76/173 (43.93%), Postives = 105/173 (60.69%), Query Frame = -3
Query:  191 PIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPG-FEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESF 706
            PI+EPEI++DG H I++   V ++V A  +  L + +VLLEG+ LKP+MV PG   A K  PE +A++ ++ L R     VP ++  SGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+N  A LG Y G+ +  E   + F
Sbjct:  220 PILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEERKKDMF 387          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29
Identity = 65/99 (65.66%), Postives = 75/99 (75.76%), Query Frame = -3
Query:  305 HVLLEGTLLKPNMVTPGFEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 598
            ++ LEGTLLKPNMVT G   PK  TPE IA  TV AL RT+PAAV  + F SGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    2 NMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26
Identity = 63/158 (39.87%), Postives = 94/158 (59.49%), Query Frame = -3
Query:  239 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPG-FEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLG 709
            VPIVEPE+ ++G + + +  +VT ++L+   K LN   V + G L+K + VT G     K TP+ +A  T+RAL  T+P  +P +VF SGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L   + +F+A  G
Sbjct:  175 VPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL---ETSFKACRG 329          
The following BLAST results are available for this feature:
BLAST of CN186257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_XANAC7.248e-3447.85Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE9.466e-3445.30Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_XYLFT9.466e-3446.63Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP2.754e-3347.24Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALDOC_CHICK2.578e-3151.82Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALFC_SPIOL3.722e-3043.93Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_LYMST9.168e-2965.66Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF_ENCCU1.464e-2639.87Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002J22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186257 ID=CN186257; Name=CN186257; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTTTTTCCCATACCGAAGTTCCCAAGCTTTTTTATTGCT
CCACCTAATACGAAAAAGCCCTAAAACTATGAATGAGAATGGGCCAACCT
AATGTTCATACCGCCTTTTACTCTCATAAAGTTCATAAAGCACAACACCC
AAAGCTTCAACTGTGCTTAGTATTTGGAGTCCTTGACATGGAAAGACTCT
GCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAGGGTAGC
CTCAAAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCTTCTGCA
CATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGAAGTGCA
CGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAGCTGGTT
CATGGCATTAAGGTTGGGGGTAGCCTCCTCCTCACTCTGCCCACCAGAAA
AGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGGGCCCGG
ACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGAGCTTCAAATCC
AGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAGAAGGACATGGG
GGTCATTCAAAGCCTTGTAGCATGCAGCAAGAACACGCTCGGTCACATCA
GCACACTTGTTGATGTCATGGGGACCGTCAACAAGGATCTCAGGTTCAAC
AATGGGAACAGGCC
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