CN186251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15 Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 303 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 731 R+L++G+L + E I +F G S K+I +N + Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSF 145
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15 Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 309 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERRQD-----DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 749 L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S A L NG +P+ + +LNWAT G + +IFVGDLA +VT+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQ 218
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15 Identity = 47/145 (32.41%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 306 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 740 SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++ N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ + +K+ TD G+SKG+GFV F +E Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDILSSKIATDE-NGKSKGFGFVHFEEE 176
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 309 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER--RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 746 L++G+L ++ +A IF G +VI N++T+ S G+GF+ + AE+ ++ NG M + A G+ ER R D P ++VG+L DV L++ F + + V A+VV+DR TGRS+G+GFV ESE Sbjct: 57 LFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVN-KAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLF-SEHGKVVSARVVSDRETGRSRGFGFVTMSSESE 202
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 48/145 (33.10%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 306 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 740 SL++GDL P + E+++ IF G S +V R+ T S GY ++ F H AA+ ++ N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ ++ +KV TD TG+SKG+G+V F ++ Sbjct: 36 SLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFT--PIKGKLCRIMWSQRDPSLRKKGAG---NIFIKNLHPDIDNKALYDTF-SVFGNILSSKVATDE-TGKSKGFGYVHFEED 173
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14 Identity = 52/158 (32.91%), Postives = 79/158 (50.00%), Query Frame = 3 Query: 303 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR--------NKQTNFS-------EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 731 R+L++G+L + E I +F G S K+I N FS + Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSF 162
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13 Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 303 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 731 ++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF-APFGRISDARVVKDMATGKSKGYGFVSF 154
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13 Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 303 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 731 ++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF-APFGRISDARVVKDMATGKSKGYGFVSF 154
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 3 Query: 306 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 746 SL++G+L+P + E+ + IF G S +V R+ TN S GY ++ F H A + ++ N T + + R+ W+ R++ G I++ +L + + L ETF + + ++ KV TD G S+G+GFV F +ES+ Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKG--KPCRIMWSQRDPSLRKKGSG---NIYIKNLHPAIDNKSLHETF-STFGNILSCKVATDE-NGVSRGFGFVHFENESD 178
BLAST of CN186251 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12 Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 276 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 731 AP+AS SL++G+L P + E+ + +F G+ S +V R+ T S GY ++ + + A ER L+ N T + + R+ W+ R+ G +F+ +L + + + L +TF A + ++ KV D G SKGYGFV + Sbjct: 40 APNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRKTGQG---NVFIKNLDSAIDNKALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFVHY 184 The following BLAST results are available for this feature:
BLAST of CN186251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186251 ID=CN186251; Name=CN186251; organism=Citrus sinensis; type=EST; length=762bpback to top |