CN186245

Overview
NameCN186245
Unique NameCN186245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2662 contig Csv1_Contig2662:496..1213. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 57/180 (31.67%), Postives = 78/180 (43.33%), Query Frame = 2
Query:  149 LW--QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 682
            LW   KE +IL LGLD AGKTT+L+ L+   +V  +PT     E LS   +K   +DLGG    R  W                   +R + + +EL  +L +E L +   L+  NK D P A S  E+   L            NLV+   R   +   S ++  G  EG  WL   IK
Sbjct:   12 LWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKEL------------NLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIK 179          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15
Identity = 56/179 (31.28%), Postives = 78/179 (43.58%), Query Frame = 2
Query:  158 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK*SKK 694
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L            NL     R  ++  CS +   G  +G  W+ + +   KK
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGL------------NLHTIRDRVWQIQSCSALTGQGVQDGMNWVCKNVNAKKK 182          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 56/179 (31.28%), Postives = 78/179 (43.58%), Query Frame = 2
Query:  158 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK*SKK 694
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L            NL     R  ++  CS +   G  +G  W+ + +   KK
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGL------------NLHTIRDRVWQIQSCSALSGEGVQDGMNWVCKNVSTKKK 182          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL2_DICDI (ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum GN=arl2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 53/179 (29.61%), Postives = 74/179 (41.34%), Query Frame = 2
Query:  131 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWL 667
            +L  L   +KE +IL LGLDNAGKTT+L     E +    PT     + L   + K   +D+GG +  R  W                    R  + K EL  LL +E  A   FL+  NK D+  A + +E+  +L L               N    E+  CS V  +G  EG  W+
Sbjct:    6 VLKKLKQKEKELRILMLGLDNAGKTTILKKFNGEDISTISPTLGFNIQTLMYKEYKLNIWDIGGQKTLRSYWRNYYEENDAVIWVIDSSDIRRIDDCKFELKKLLEEEKFAGASFLVFANKQDLDGAMTSEEISKYLDLEQL------------NTHHWEIMSCSAVTGLGLEEGIDWV 172          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 56/175 (32.00%), Postives = 75/175 (42.86%), Query Frame = 2
Query:  158 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 682
            KEA+IL LGLDNAGKTT+L+ L+   +V   PT     E +    IKF+ +DLGG    R  W                   +R   +K E  A+L +E L     LI  NK D+P A  +  +   L L    +            R   +F    V+  G  EG  WLS  +K
Sbjct:   16 KEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKS------------RQWAIFKTCAVKGEGLFEGLDWLSNTLK 178          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL3_MOUSE (ADP-ribosylation factor-like protein 3 OS=Mus musculus GN=Arl3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 56/179 (31.28%), Postives = 78/179 (43.58%), Query Frame = 2
Query:  158 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK*SKK 694
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L            NL     R  ++  CS +   G  +G  W+ + +   KK
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGL------------NLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 56/179 (31.28%), Postives = 78/179 (43.58%), Query Frame = 2
Query:  158 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK*SKK 694
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L            NL     R  ++  CS +   G  +G  W+ + +   KK
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGL------------NLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL3_HUMAN (ADP-ribosylation factor-like protein 3 OS=Homo sapiens GN=ARL3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 56/179 (31.28%), Postives = 78/179 (43.58%), Query Frame = 2
Query:  158 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK*SKK 694
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L            NL     R  ++  CS +   G  +G  W+ + +   KK
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGL------------NLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 2
Query:  161 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSI-GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNF 556
            EA+++ +GLD+AGKTTLL+ LK  +LV+  PT     E L   G +    +D+GG    R  W                    R  E+  EL  +L D S+A+VP L+L NK ++P A S  E+R  LGL  F
Sbjct:   12 EAQVVMMGLDSAGKTTLLYRLKGYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGF 144          
BLAST of CN186245 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 55/175 (31.43%), Postives = 75/175 (42.86%), Query Frame = 2
Query:  158 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 682
            KEA+IL LGLDNAGKTT+L+ L+   +V   PT     E +    IKF+ +DLGG    R  W                   +R   +K E  A+L ++ L     LI  NK D+P A  +  +   L L    +            R   +F    V+  G  EG  WLS  +K
Sbjct:   16 KEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKS------------RQWAIFKTCAVKGEGLFEGLDWLSNTLK 178          
The following BLAST results are available for this feature:
BLAST of CN186245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
ARL1_YEAST2.611e-1531.67ADP-ribosylation factor-like protein 1 OS=Saccharo... [more]
ARL3_XENLA3.410e-1531.28ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARL3_TAEGU5.816e-1531.28ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]
ARL2_DICDI5.816e-1529.61ADP-ribosylation factor-like protein 2 OS=Dictyost... [more]
ARF1_BRARP7.596e-1532.00ADP-ribosylation factor 1 OS=Brassica rapa subsp. ... [more]
ARL3_MOUSE9.921e-1531.28ADP-ribosylation factor-like protein 3 OS=Mus musc... [more]
ARL3_PIG1.296e-1431.28ADP-ribosylation factor-like protein 3 OS=Sus scro... [more]
ARL3_HUMAN1.296e-1431.28ADP-ribosylation factor-like protein 3 OS=Homo sap... [more]
ARL11_BOVIN1.692e-1436.84ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARF3_ARATH1.692e-1431.43ADP-ribosylation factor 3 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002J15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186245 ID=CN186245; Name=CN186245; organism=Citrus sinensis; type=EST; length=717bp
GAGGGTTGATTCCTCCTAATTATCTCAAAGATTCATCATATTTGAGCCAA
AATTCGATCTTTTTGATAGATTCATTATAAATAAGGAGTAATAAAAGAAA
CCCATGTTTTTGTTTGATTGGTTTTATGGGATTCTTGCATCTCTTGGGCT
CTGGCAAAAAGAGGCCAAGATCTTGTTTCTCGGCCTCGATAATGCCGGTA
AAACGACGCTGCTTCATATGTTGAAAGATGAGAGATTAGTTCAACATCAA
CCAACACAACATCCCACTTCGGAGGAACTGAGTATTGGGAAAATCAAGTT
TAAGGCTTTTGATTTGGGAGGGCATCAGATTGCTCGTAGAGTTTGGAAAG
ATTACTACGCCAAGGTTGATGCGGTTGTGTACCTGGTAGATGCGTATGAC
AAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCTTGATGCCCTGCTTTCAGA
TGAATCCTTGGCCAATGTTCCATTCCTAATTTTGGGCAACAAAATTGATA
TCCCATATGCTGCATCAGAAGATGAGTTGCGATATCACCTTGGACTGACC
AACTTCACCACTGGCAAGGGTAAGGTGAATCTGGTTGATTCAAACGTTCG
TCCCCTTGAGGTATTCATGTGCAGCATTGTCCGCAAAATGGGTTACGGAG
AGGGATTTAAGTGGCTGTCTCAGTACATCAAGTAGAGCAAGAAGTAGAAT
TTGTTCGGTTCTTTCTT
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