EY665736

Overview
NameEY665736
Unique NameEY665736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 72/258 (27.91%), Postives = 109/258 (42.25%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804
            FG GELVD PK IA+ YL  YF IDL ++                    +   K+ L   I  QYIPR+ +  PL+   + T G + E+AWA    NL  + L+ H+ G+ WYL  ++R ++C R+AC         + L C    +  +   T      NP+  +      F++GI+  A+K               CF    +N  + G+N     F  G   F + I    L++F  L   +     S   + EE
Sbjct:  151 FGRGELVDDPKAIAIKYLSSYFIIDL-LSILPLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSVRNDFLTTSCPFINPD--DITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNLSALGQNLNTSKFV-GEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEE 404          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.195e-18
Identity = 75/262 (28.63%), Postives = 113/262 (43.13%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDC-KKLLDCGNGGAEYSQDQTRKSWRGN---PNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804
            FG GEL +  K IAL YL  YF IDL ++                    +  AK LL+  I  QY+PR+ +  PLF   + T G + E+AWA   +NLF + L+ H+ GS WYL  ++R ++C R+AC  +  Q+C    L C   G     +  R    G+    +         F++GI+  A++               CF    +N  + G+N     F  G   F + I    L++F  L   +     S   + EE
Sbjct:  155 FGRGELNEKHKDIALRYLGSYFLIDL-LSILPIPQVVVLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREAC--AKIQNCTHAYLYCSPTG-----EDNRLFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLSALGQNLKTSAF-EGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEE 407          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18
Identity = 72/259 (27.80%), Postives = 114/259 (44.02%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCK-KLLDCGNGGAEYSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804
            FG GELVD  K IAL YL  YF IDL ++                    +   K+ L+ +I+ QY+PR+ +  PL+   + T G + E+AWA    NL  + L+ H+ G+ WYL  ++R ++C ++AC  +  + C  K L C N     +   T      +P   +      F++GI+  A+K      +        CF    +N  + G+N     F  G   F + I    L++F  L   +     S   + EE
Sbjct:  151 FGRGELVDDAKAIALKYLSSYFIIDL-LSILPLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKT--KGCNMKFLYCENDRNVSNNFLTTSCPFLDP--GDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKFV-GEIIFAISICISGLVLFALLIGNMQKYLESTTVREEE 403          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 76/270 (28.15%), Postives = 116/270 (42.96%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASG-ANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNS----------SFQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNASNC-FEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804
            FG GELV   ++IA+ YL+  F ID  VA                  +G AN+A + L   +L+QYIPR +   PL      +TGFI ++AWA    NL  + L+ H++G+ WYL  + R   C  + C             SF DCK L        +Y Q+ T+     +  +S   F+   F+     Q       +KY      + C     +N  S+G+N T  ++  G   F + I    L++F  L   +  +  S   + EE
Sbjct:  122 FGRGELVMDSREIAMRYLKTDFLID--VAAMLPLPQLVIWLVIPAATNGTANHANSTLALIVLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSL---EQPERQYWQNVTQVLSHCDATSSTTNFKFGMFAEAFTTQVATTDFVSKY------LYCLWWGLRNLSSYGQNITTSVYL-GETLFCITICIFGLILFTLLIGNMQSSLQSMSVRVEE 379          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15
Identity = 60/190 (31.58%), Postives = 89/190 (46.84%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCK-KLLDCGNGGAE-------YSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAV 576
            FG GELV  P +IA  YL+ +F ID F++                  S     K  L   +L+QYIPR  + LPL +    T  +F E+AWA     L  + L+ HIVG+ WYL  L+R + C ++AC ++   +C    L CGN   +         +   +   R + + +N      F +GIY QA+
Sbjct:  171 FGRGELVIDPAQIAKRYLQRWFIID-FLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLALERNDACWQEACIDAG--NCSTDFLYCGNQNMDGYAVWNRAKESVLKSKCRADLDDNN----PPFDFGIYTQAL 353          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 57/191 (29.84%), Postives = 87/191 (45.55%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDAC----HNSSFQDCKKL-LDCGNGGAEYSQDQTRKSW-RGNPNASNCFEKD----KFSYGIYEQA 573
            FG GELV   ++IA+ YL+  F IDL                       A +  + L   +L+QY+PR    LPL      +TG   ++AW+    NL  + L  H++GS WY+  +QR ++C R  C    + +    C  L LDCG+       D  R++W R     SNC  ++     F +G++  A
Sbjct:  127 FGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQNHTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGS-----LHDPGRQAWMRITRVLSNCDARNDDDQHFQFGMFGDA 312          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13
Identity = 59/242 (24.38%), Postives = 99/242 (40.91%), Query Frame = 1
Query:   97 FFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLP-LFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGN----GGAEYSQDQTRKSWRGNPNA-SNCFE-KDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSE 801
            FF DLFV                          ++L    L QY+P++Y  +  L    + +G+IF + W    +N+  + ++ H  G+ WYL G+QR  +CL++ C N+   D  ++L C      G      D+ R +W  N  A S C +    ++YG Y+  ++L +      +I + P F G            T +   W    F + +L   LL+   L   I     +  SK +
Sbjct:  189 FFFDLFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDL-RMLSCKEPVYYGTTVMVLDRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKI-LFPIFWGLMTLSTFGNLESTTE---WSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ 425          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12
Identity = 65/253 (25.69%), Postives = 100/253 (39.53%), Query Frame = 1
Query:   37 GAGELVDHPKKIALNYLRGY--FFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAG-QSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAEYSQDQTRKSWRGNP----------NASNCFEKD-KFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFL 753
            G G+LV  P+ IA +Y R    F+ D+ V                           +L    L Q++P++Y  + L    Q  TG+IF + W  F +NL  + ++ H+ G  WY+  +QRV  C+R  C  +   +C   L C           T  S  G P          N   C + +  F YGIY  A+ + + N    +I + P F G      S   N       W    F++ ++   LL+F  L
Sbjct:  199 GCGKLVWDPRAIASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTG--NCNLSLACKEEVCYQFVSPT--STVGYPCLSGNLTSVVNKPMCLDSNGPFRYGIYRWALPVISSNSLAVKI-LYPIFWGLM--TLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLL 444          
The following BLAST results are available for this feature:
BLAST of EY665736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CNG13_ARATH4.743e-1827.91Putative cyclic nucleotide-gated ion channel 13 OS... [more]
CNGC3_ARATH6.195e-1828.63Probable cyclic nucleotide-gated ion channel 3 OS=... [more]
CNG10_ARATH8.090e-1827.80Probable cyclic nucleotide-gated ion channel 10 OS... [more]
CNG18_ARATH1.292e-1528.15Putative cyclic nucleotide-gated ion channel 18 OS... [more]
CNGC5_ARATH2.877e-1531.58Probable cyclic nucleotide-gated ion channel 5 OS=... [more]
CNG16_ARATH9.256e-1429.84Probable cyclic nucleotide-gated ion channel 16 OS... [more]
CNGC4_ARATH2.693e-1324.38Cyclic nucleotide-gated ion channel 4 OS=Arabidops... [more]
CNGC2_ARATH2.280e-1225.69Cyclic nucleotide-gated ion channel 2 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665736 ID=EY665736; Name=EY665736; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGTGGCTCCTGAGTCTAGGCCCGTTTGGTGCTGGGGAGTT
AGTTGACCATCCAAAGAAAATCGCTCTGAATTACCTCCGTGGATACTTTT
TTATCGACTTATTTGTTGCATTACCACTTCCGCAAATCATAATCTTGTTA
GTGCTACCCAATATCTTGGGAGCATCTGGCGCAAATTATGCCAAAAATCT
CTTACGTGCTGCTATTCTTCTTCAGTACATTCCCAGGCTGTATAAGTTTC
TACCCCTGTTTGCCGGTCAGTCATCGACTGGCTTCATATTTGAGTCTGCC
TGGGCAAATTTTTTTATTAATCTTTTCACCTTCACATTATCTGGTCACAT
TGTTGGGTCAGGCTGGTACCTCTTCGGGTTACAGAGGGTTAATCAATGTC
TTCGAGATGCCTGCCACAATTCTTCATTCCAAGATTGCAAGAAACTCTTA
GATTGCGGGAATGGTGGTGCAGAATATAGTCAAGATCAAACACGGAAGAG
CTGGAGAGGCAATCCAAATGCTAGTAATTGTTTTGAGAAGGATAAATTTT
CTTATGGAATTTATGAACAAGCTGTCAAACTTACTGCAGAAAATAAGTAT
CATCACCAAATATGTGTAATTCCCTGTTTTGGGGGATTCCAGCAAAATCC
ATACTCTTGGGGGGAAAATAAAACCCCCCAACTATTTTGTTGGGGAAATC
ACTTTTTTACCTTGCCCATATTGGAACTAACCCTCCTTGTCTTTTGCTTT
CTTCATGAGAAAATAAACCACAATTTTCCCTCACCTCTATCAAAAAGCGA
GGAGCGCCTCTTTTCTACGCCCCCTGCCTCGCGCGACCCAGCAATCTAAT
ATCGTATCTTTTTACCCGAACCAAAGAGAAAAACGAAA
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