EY665736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18 Identity = 72/258 (27.91%), Postives = 109/258 (42.25%), Query Frame = 1 Query: 34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804 FG GELVD PK IA+ YL YF IDL ++ + K+ L I QYIPR+ + PL+ + T G + E+AWA NL + L+ H+ G+ WYL ++R ++C R+AC + L C + + T NP+ + F++GI+ A+K CF +N + G+N F G F + I L++F L + S + EE Sbjct: 151 FGRGELVDDPKAIAIKYLSSYFIIDL-LSILPLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSVRNDFLTTSCPFINPD--DITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNLSALGQNLNTSKFV-GEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEE 404
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 6.195e-18 Identity = 75/262 (28.63%), Postives = 113/262 (43.13%), Query Frame = 1 Query: 34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDC-KKLLDCGNGGAEYSQDQTRKSWRGN---PNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804 FG GEL + K IAL YL YF IDL ++ + AK LL+ I QY+PR+ + PLF + T G + E+AWA +NLF + L+ H+ GS WYL ++R ++C R+AC + Q+C L C G + R G+ + F++GI+ A++ CF +N + G+N F G F + I L++F L + S + EE Sbjct: 155 FGRGELNEKHKDIALRYLGSYFLIDL-LSILPIPQVVVLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREAC--AKIQNCTHAYLYCSPTG-----EDNRLFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLSALGQNLKTSAF-EGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEE 407
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18 Identity = 72/259 (27.80%), Postives = 114/259 (44.02%), Query Frame = 1 Query: 34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCK-KLLDCGNGGAEYSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804 FG GELVD K IAL YL YF IDL ++ + K+ L+ +I+ QY+PR+ + PL+ + T G + E+AWA NL + L+ H+ G+ WYL ++R ++C ++AC + + C K L C N + T +P + F++GI+ A+K + CF +N + G+N F G F + I L++F L + S + EE Sbjct: 151 FGRGELVDDAKAIALKYLSSYFIIDL-LSILPLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKT--KGCNMKFLYCENDRNVSNNFLTTSCPFLDP--GDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKFV-GEIIFAISICISGLVLFALLIGNMQKYLESTTVREEE 403
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15 Identity = 76/270 (28.15%), Postives = 116/270 (42.96%), Query Frame = 1 Query: 34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASG-ANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNS----------SFQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNASNC-FEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804 FG GELV ++IA+ YL+ F ID VA +G AN+A + L +L+QYIPR + PL +TGFI ++AWA NL + L+ H++G+ WYL + R C + C SF DCK L +Y Q+ T+ + +S F+ F+ Q +KY + C +N S+G+N T ++ G F + I L++F L + + S + EE Sbjct: 122 FGRGELVMDSREIAMRYLKTDFLID--VAAMLPLPQLVIWLVIPAATNGTANHANSTLALIVLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSL---EQPERQYWQNVTQVLSHCDATSSTTNFKFGMFAEAFTTQVATTDFVSKY------LYCLWWGLRNLSSYGQNITTSVYL-GETLFCITICIFGLILFTLLIGNMQSSLQSMSVRVEE 379
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15 Identity = 60/190 (31.58%), Postives = 89/190 (46.84%), Query Frame = 1 Query: 34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCK-KLLDCGNGGAE-------YSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAV 576 FG GELV P +IA YL+ +F ID F++ S K L +L+QYIPR + LPL + T +F E+AWA L + L+ HIVG+ WYL L+R + C ++AC ++ +C L CGN + + + R + + +N F +GIY QA+ Sbjct: 171 FGRGELVIDPAQIAKRYLQRWFIID-FLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLALERNDACWQEACIDAG--NCSTDFLYCGNQNMDGYAVWNRAKESVLKSKCRADLDDNN----PPFDFGIYTQAL 353
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14 Identity = 57/191 (29.84%), Postives = 87/191 (45.55%), Query Frame = 1 Query: 34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDAC----HNSSFQDCKKL-LDCGNGGAEYSQDQTRKSW-RGNPNASNCFEKD----KFSYGIYEQA 573 FG GELV ++IA+ YL+ F IDL A + + L +L+QY+PR LPL +TG ++AW+ NL + L H++GS WY+ +QR ++C R C + + C L LDCG+ D R++W R SNC ++ F +G++ A Sbjct: 127 FGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQNHTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGS-----LHDPGRQAWMRITRVLSNCDARNDDDQHFQFGMFGDA 312
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 59/242 (24.38%), Postives = 99/242 (40.91%), Query Frame = 1 Query: 97 FFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLP-LFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGN----GGAEYSQDQTRKSWRGNPNA-SNCFE-KDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSE 801 FF DLFV ++L L QY+P++Y + L + +G+IF + W +N+ + ++ H G+ WYL G+QR +CL++ C N+ D ++L C G D+ R +W N A S C + ++YG Y+ ++L + +I + P F G T + W F + +L LL+ L I + SK + Sbjct: 189 FFFDLFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDL-RMLSCKEPVYYGTTVMVLDRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKI-LFPIFWGLMTLSTFGNLESTTE---WSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ 425
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 65/253 (25.69%), Postives = 100/253 (39.53%), Query Frame = 1 Query: 37 GAGELVDHPKKIALNYLRGY--FFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAG-QSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAEYSQDQTRKSWRGNP----------NASNCFEKD-KFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFL 753 G G+LV P+ IA +Y R F+ D+ V +L L Q++P++Y + L Q TG+IF + W F +NL + ++ H+ G WY+ +QRV C+R C + +C L C T S G P N C + + F YGIY A+ + + N +I + P F G S N W F++ ++ LL+F L Sbjct: 199 GCGKLVWDPRAIASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTG--NCNLSLACKEEVCYQFVSPT--STVGYPCLSGNLTSVVNKPMCLDSNGPFRYGIYRWALPVISSNSLAVKI-LYPIFWGLM--TLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLL 444 The following BLAST results are available for this feature:
BLAST of EY665736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665736 ID=EY665736; Name=EY665736; organism=Citrus sinensis; type=EST; length=888bpback to top |