CN186244

Overview
NameCN186244
Unique NameCN186244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2662 contig Csv1_Contig2662:594..1343. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.221e-60
Identity = 121/192 (63.02%), Postives = 139/192 (72.40%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M++ +WFY ILASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK ELDALL+ E LA VPFLILGNKID P A SEDELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYGEG +WLSQY+
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_ASPOR (Small COPII coat GTPase sar1 OS=Aspergillus oryzae GN=sar1 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.221e-60
Identity = 120/192 (62.50%), Postives = 139/192 (72.40%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M++ +WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK ELDALL+ E LA VPFLILGNKID P A SEDELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYGEG +WLSQY+
Sbjct:    1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.221e-60
Identity = 121/192 (63.02%), Postives = 139/192 (72.40%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M+L +WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK ELDALL+ E LA VPFLILGNKID P A SEDELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYGEG +WLSQY+
Sbjct:    1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.789e-60
Identity = 119/192 (61.98%), Postives = 139/192 (72.40%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M++ +WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK ELDALL+ E L+ VPFLILGNKID P A SEDELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYGEG +WLSQY+
Sbjct:    1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.880e-59
Identity = 117/192 (60.94%), Postives = 138/192 (71.88%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M++ +WFY +L+SLGLW K AK+LFLGLDNAGKTTLLHMLK++R+    PT HPTSEELSIG  KF  FDLGGH  ARRVW                    RFAESK ELD+LL+ E L  VPFLILGNKID+P A SE EL+  LGL   TTGKGKV L + N+RP+E+FMCSIV + GYG+G +WLSQY+
Sbjct:    1 MWIVNWFYDVLSSLGLWNKNAKLLFLGLDNAGKTTLLHMLKNDRMAVSNPTVHPTSEELSIGNCKFTTFDLGGHIQARRVWKDYFPEVNGIVFLVDAADPTRFAESKAELDSLLAIEQLKTVPFLILGNKIDMPQAVSELELKDALGLYQ-TTGKGKVPL-EGNIRPIEIFMCSIVMRQGYGDGIRWLSQYV 190          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.456e-59
Identity = 116/192 (60.42%), Postives = 140/192 (72.92%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M++ +WFY +L+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEEL+IG ++F  FDLGGHQ ARR+W                   +RF E+K ELDALLS E LA VPF+ILGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYGEG +WLSQY+
Sbjct:    1 MWIINWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.471e-59
Identity = 118/192 (61.46%), Postives = 137/192 (71.35%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M++ +WFY ILASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+    PT HPTSEEL IG  +F  FDLGGHQ ARR+W                   ERF ESK ELDALL+ E L+ VPFL+LGNKID P A SEDELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYGEG +WLSQY+
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILSPTAHPTSEELVIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLVLGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.332e-59
Identity = 118/192 (61.46%), Postives = 138/192 (71.88%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M+L +WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEEL+IG  +F  FDLGGHQ ARR+W                   E F ESK ELDALL+ E LA VPFLILGNKID P A SED++R+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYGEG +WLSQY+
Sbjct:    1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.332e-59
Identity = 113/195 (57.95%), Postives = 137/195 (70.26%), Query Frame = -3
Query:  169 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 741
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR   GL   TTGKG V+L + N RPLEVFMCS++++ GYGEGF+W++QYI
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.219e-58
Identity = 113/192 (58.85%), Postives = 139/192 (72.40%), Query Frame = -3
Query:  169 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 744
            M++ +WFY +L+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEEL+IG ++F  FDLGGHQ ARR+W                   ERF E+K ELDALLS E L+ VPF+ILGNKID P A SEDELR+ LGL   TTGKG+V L    +RP+E+FMCS+V + GYG+G +WLS Y+
Sbjct:    1 MWIVNWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQL--EGIRPIELFMCSVVMRQGYGDGIRWLSNYV 189          
The following BLAST results are available for this feature:
BLAST of CN186244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
SAR1_ASPTN2.221e-6063.02Small COPII coat GTPase sar1 OS=Aspergillus terreu... [more]
SAR1_ASPOR2.221e-6062.50Small COPII coat GTPase sar1 OS=Aspergillus oryzae... [more]
SAR1_ASPNC2.221e-6063.02Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1_ASPCL3.789e-6061.98Small COPII coat GTPase sar1 OS=Aspergillus clavat... [more]
SAR1_YARLI1.880e-5960.94Small COPII coat GTPase SAR1 OS=Yarrowia lipolytic... [more]
SAR1_MAGGR2.456e-5960.42Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1_EMENI5.471e-5961.46Small COPII coat GTPase sar1 OS=Emericella nidulan... [more]
SAR1_ASPNG9.332e-5961.46Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1B_MOUSE9.332e-5957.95GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]
SAR1_TRIRE1.219e-5858.85Small COPII coat GTPase sar1 OS=Trichoderma reesei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002J15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186244 ID=CN186244; Name=CN186244; organism=Citrus sinensis; type=EST; length=749bp
TTTTTTTTAAGTCTTGTAACAGGATGGACGTTGCATGCCTTTTATTTCAT
AGGCGAAATGGGAGAATACAAGAATCTCCCCTTTTTAAAGGAAACGCATC
AACCTCAATTCATTGTGTAAACAACATATAAAGAAAGAACCGAACAAATT
CTACTTCTTGCTCTACTTGATGTACTGAGACAGCCACTTAAATCCCTCTC
CGTAACCCATTTTGCGGACAATGCTGCACATGAATACCTCAAGGGGACGA
ACGTTTGAATCAACCAGATTCACCTTACCCTTGCCAGTGGTGAAGTTGGT
CAGTCCAAGGTGATATCGCAACTCATCTTCTGATGCAGCATATGGGATAT
CAATTTTGTTGCCCAAAATTAGGAATGGAACATTGGCCAAGGATTCATCT
GAAAGCAGGGCATCAAGCTCCCTTTTTGACTCAGCAAACCTCTCCTTGTC
ATACGCATCTACCAGGTACACAACCGCATCAACCTTGGCGTAGTAATCTT
TCCAAACTCTACGAGCAATCTGATGCCCTCCCAAATCAAAAGCCTTAAAC
TTGATTTTCCCAATACTCAGTTCCTCCGAAGTGGGATGTTGTGTTGGTTG
ATGTTGAACTAATCTCTCATCTTTCAACATATGAAGCAGCGTCGTTTTAC
CGGCATTATCGAGGCCGAGAAACAAGATCTTGGCCTCTTTTTGCCAGAGC
CCAAGAGATGCAAGAATCCCATAAAACCAATCAAACAAAAACATGGGTT
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