CN186244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.810e-55 Identity = 109/195 (55.90%), Postives = 135/195 (69.23%), Query Frame = -3 Query: 169 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 741 F+F+W Y +L LGL++K K++FLGLDNAGKTTLL MLKD+RL QH PT HPTSEEL+I + F FDLGGH+ ARRVW R ESK EL+AL++DE+++NVP LILGNKID A SE++LR GL TTGKG V L + N RP+EVFMCS++++ GYGEGF+WLSQYI Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.068e-54 Identity = 112/185 (60.54%), Postives = 130/185 (70.27%), Query Frame = -3 Query: 169 YGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 723 + +L+SLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT HPTSEELSIG +KF FDLGGH ARR+W ER ESK ELDALL+ E L N PF+ILGNKID P A SED+LR LGL TTGKGKV L +RP+EVFMCS+V + GYGEG +WLSQY+ Sbjct: 4 WDVLSSLGLMNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 185
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.299e-54 Identity = 112/190 (58.95%), Postives = 127/190 (66.84%), Query Frame = -3 Query: 169 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 738 LF WF IL+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF FDLGGH ARR+W ERF E++ ELDAL + L NVPF +LGNKID P A SE ELR LGL N TTG K+ RP+E+FMCS+V K GY E FKWLS+YI Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKI----EGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.652e-53 Identity = 111/190 (58.42%), Postives = 126/190 (66.32%), Query Frame = -3 Query: 169 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 738 LF WF IL+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF FDLGGH ARR+W ERF E++ ELDAL L VPF+ILGNKID P A SE ELR LGL N TTG ++ RP+E+FMCS+V K GY E F+WLSQYI Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLN-TTGDARI----EGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.993e-53 Identity = 110/190 (57.89%), Postives = 128/190 (67.37%), Query Frame = -3 Query: 169 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 738 +F WF +LASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF FDLGGH ARR+W ERF E++ ELDAL + L +VPF+ILGNKID P A SE ELR LGL N TTG ++ RP+EVFMCS+V + GY E F+WLSQYI Sbjct: 6 IFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.885e-51 Identity = 108/190 (56.84%), Postives = 127/190 (66.84%), Query Frame = -3 Query: 169 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 738 +F WF +LASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF FDLGGH ARR+W +RF E++ ELDAL + L +VPF+ILGNKID A SE ELR LGL N TTG ++ RP+EVFMCS+V + GY E F+WLSQYI Sbjct: 5 VFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 189
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.971e-44 Identity = 90/188 (47.87%), Postives = 119/188 (63.30%), Query Frame = -3 Query: 169 DWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 732 DWF L+ LGL++K+A I+F+GLDNAGK+TLL MLK+ PTQ PTS+EL +G I+FK FDLGGH++AR++W RF ES+R L LL + LA P LIL NK+DI A S + + G+ + TGKG NL S+ RPLEVF CS++ + GY +GFKWLS+Y+ Sbjct: 5 DWFKSALSFLGLYKKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNL-RSDQRPLEVFPCSVINRFGYTDGFKWLSKYL 191
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.098e-26 Identity = 71/191 (37.17%), Postives = 96/191 (50.26%), Query Frame = -3 Query: 175 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVW-XXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQ 744 MFL DWFY + LG ++KEAKI+ +GL NAGKTTLLH+L L H PT P +E + G + FKA+DLGG Q R +W ESK E+ +L DE L+ P LILG+K D + + L L + F G L +SN P ++ M S + + G + WL + Sbjct: 1 MFLVDWFYNMFLWLGFFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRRFELG-----LNNSNNVPFDLIMTSSITRYGITDMLNWLDK 186
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = -3 Query: 346 LWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDI 699 L+ K + ILFLG+DNAGKTTL++ LK + + PT HP++ + IG +K + DLGGH AR W ERF E + + +LS E A P ++L NKID+ Sbjct: 31 LFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLSLEKRA--PVVVLMNKIDL 146
BLAST of CN186244 vs. ExPASy Swiss-Prot
Match: ARL3_CAEEL (ADP-ribosylation factor-like protein 3 OS=Caenorhabditis elegans GN=arl-3 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.276e-15 Identity = 57/180 (31.67%), Postives = 84/180 (46.67%), Query Frame = -3 Query: 154 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS-IGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK*SKK 690 +E +IL LGLDNAGKTT+L L E + PT+ + ++ +G I+ +D+GG + R W K+RF E EL LL +E L VP LI NK D+ AAS +E+ K+NL R + CS ++ G +G W++ +K + K Sbjct: 16 REIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEI------------TRKLNLDLLRDRTWHIQACSALKNEGINDGITWVASNLKPASK 183 The following BLAST results are available for this feature:
BLAST of CN186244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 167
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186244 ID=CN186244; Name=CN186244; organism=Citrus sinensis; type=EST; length=749bpback to top |