CN186238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 346 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F++ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVLLKYTEY 72
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MEF2C_MOUSE (Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 346 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F++ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVLLKYTEY 72
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MEF2C_HUMAN (Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 346 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F++ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVLLKYTEY 72
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MEF2C_BOVIN (Myocyte-specific enhancer factor 2C OS=Bos taurus GN=MEF2C PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 346 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F++ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVLLKYTEY 72
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 346 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F++ +LF+Y STD M+R+L +Y Y Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTD--MDRVLLKYTEY 72
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15 Identity = 37/70 (52.86%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERY 337 MGR ++ +++I N+ NRQ TF+KR++GL+KKA E+S+LCD E+A+IVFS+ KLF+YS+ M+++L RY Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRD-MDKLLIRY 71
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MEF2B_MOUSE (Myocyte-specific enhancer factor 2B OS=Mus musculus GN=Mef2b PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15 Identity = 38/73 (52.05%), Postives = 60/73 (82.19%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERY 346 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD ++ALI+F++ +LF+Y++ S M+R+L +Y Y Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCDIALIIFNSAQRLFQYAS-SDMDRVLLKYTEY 72
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11 Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 131 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY---STDSCMERILERYERYCYAERQLQANEIEPN 391 GR ++++ +++N+ N QVTFSKRRSGL KKA E+ LC AEVA++VFS K+F + + DS ++R + + +Q E N Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRN 96
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11 Identity = 48/157 (30.57%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 125 NMGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY---STDSCMERILERYERYCYAERQLQ---ANEIEPNGNWT-----LEYSKLKA------RMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLI 544 ++GR ++ + +I+ + +RQVTFSKRR+GL KKA E+ LC AE+ +IVFS K F + S +S ++R + R +QLQ A E N T +E K K R E ++R+ ++ + + ++++ +LQ ++ ++ K + Sbjct: 61 SIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217 The following BLAST results are available for this feature:
BLAST of CN186238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186238 ID=CN186238; Name=CN186238; organism=Citrus sinensis; type=EST; length=764bpback to top |