CN186238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.926e-24 Identity = 59/153 (38.56%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANE-IEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLAD-LSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 580 M RG+VQL+RIEN ++RQVTF KRR+GLLKKA E+S+LC+A++ +I+FS GKL++ +T ME ++ERY+ + ++ ++P E LK + +LQ+ ++ G + ++++EL ++E+ ++ + IRS K Q+M+Q I Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDPK----QEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEI 149
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24 Identity = 61/155 (39.35%), Postives = 98/155 (63.23%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQ----LQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 580 M RG+VQ++RIEN ++RQVTF KRR GLLKKA E+SVLCDA+V +I+FS++GKL E +T+ M ++ERY+ + LQ ++ G + L+ +++LQR + G +++L +L ++E+ ++ + IR+ K Q+M Q I Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFL-----LREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEI 150
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.011e-23 Identity = 59/148 (39.86%), Postives = 100/148 (67.57%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 568 MGRG++++KRIEN NRQVT+SKRR+G++KKA EI+VLCDA+V+LI+F GK+ EY S + + +L+ Y++ + R+L + E N + E ++K + +Q +H GED+ L+ KEL +E+ + +GL I +++++++ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQK--TSGRRLWDAKHE---NLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEIL 143
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.252e-23 Identity = 60/159 (37.74%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEV-------LQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 580 M RG++Q+KRIEN+ NRQVT+SKRR+GL KKAHE+SVLCDA+V++I+ S+ KL EY S + +++ ++Y++ + W+ Y K++ ++ L+R + MGE L DL +++ ++ + +D+ LKLIR RK +++ I Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDL------------WSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQI 147
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.941e-23 Identity = 58/151 (38.41%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 580 MGRG++++K+IEN+ RQVTFSKRR+GL+KK E+S+LCDA + LIVFS GKL E+ ++ R+ + +RY + + + E L+ L+ + F G DLA + EL +E+Q++ + +R RKN+LM Q + Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE--QNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQL 149
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.552e-23 Identity = 59/151 (39.07%), Postives = 97/151 (64.24%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKL-KARMEVLQRNQ------KHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRK 556 M RG++Q+KRIEN+ NRQVT+SKRR+GL KKAHE++VLCDA V++I+FS+ KL EY S ++ + I++ Y+ I W +Y ++ + + ++L+ N+ K +GE L +L ++EL+ +E ++++ KL+R RK Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQ------------TISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERK 139
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.557e-23 Identity = 57/152 (37.50%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 583 M R ++Q+++I+N RQVTFSKRR GL KKA E+SVLCDA+VALI+FS+ GKLFE+ + S M+ +LER+ +L +E +++++ + + GE+L L ++ELQ +E+ +++GL + K+ ++ IS Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSS-MKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEIS 151
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.118e-22 Identity = 57/155 (36.77%), Postives = 98/155 (63.23%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDS-CMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHF-------MGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 568 M RG++Q+KRIEN+ NRQVT+SKRR+GL KKA+E++VLCDA+V++I+ S+ GKL E+ + S +++ + Y++ + W Y K++ ++ L+ ++ MGE L DL+ ++L+ + + +D+ LKLIR RK +++ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDL------------WNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVI 143
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.460e-22 Identity = 65/155 (41.94%), Postives = 96/155 (61.94%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSK---LKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 583 M R R ++KRIE+ RQVTFSKRR GL KKA E+SVLCDA+VALIVFS+ GKL +++ S M I+++Y + L E +P+ + LE+SK L ++ + GE+L LS+ ELQ +E+ +++GL + K+Q ++ IS Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS-MNEIIDKYNTH---SNNLGKAE-QPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQIS 150
BLAST of CN186238 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.906e-22 Identity = 55/148 (37.16%), Postives = 98/148 (66.22%), Query Frame = 2 Query: 128 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 568 MGRG++++KRIEN NRQVT+SKRR+G++KKA EISVLCDA V++I+F++ GK+ E+ S + + +L+ Y + + ++L + E N E +++K + +Q +H GED+ L+ KEL +E +++G +++++ + + Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHK--LSGKRLWDPKHEHLDN---EINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFV 143 The following BLAST results are available for this feature:
BLAST of CN186238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186238 ID=CN186238; Name=CN186238; organism=Citrus sinensis; type=EST; length=764bpback to top |