CN186237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.005e-13 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = -3 Query: 608 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 793 W EY KLKA++E +Q+ KH MGEDL L+LKELQ +EQQ++S LK I SRK+ LML+SIS Sbjct: 91 WCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESIS 152
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = -3 Query: 611 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 793 W E SKLKA+ E LQR Q+H +GEDL LS+KELQ +E+Q++ L R RK QLM++ + Sbjct: 89 WYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQV 149
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = -3 Query: 611 EYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 784 EY KLKAR E LQR+Q++ +GEDL L+ KEL+S+E+Q+D LK IRS + QLML + Sbjct: 95 EYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQL 152
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = -3 Query: 611 EYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 784 EY KLKAR E LQR+Q++ MGEDL LS K+L+++E+Q+DS LK IRS + Q ML + Sbjct: 97 EYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQL 154
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11 Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = -3 Query: 611 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 793 W E S+LK ++E LQR+Q+H +GEDL LS+KELQ +E+Q++ L R RK Q+M++ + Sbjct: 91 WYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQV 151 The following BLAST results are available for this feature:
BLAST of CN186237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186237 ID=CN186237; Name=CN186237; organism=Citrus sinensis; type=EST; length=795bpback to top |