CN186236

Overview
NameCN186236
Unique NameCN186236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R1_RAT (NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus GN=Cyb5r1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.897e-44
Identity = 86/190 (45.26%), Postives = 123/190 (64.74%), Query Frame = -3
Query:  194 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPK------FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNYDTK 742
            LV+K+Y KGVHPKF  GG MSQYLDSL +G +++ +GP G + Y G+GNF +    K       AKKL M+AGGTGITP+ Q+++AILK PED T+ ++++AN+T           +   ++  R K+W+ ++    E W YS GF+T  +++EH+P  + D L L CGPPPM+Q A  PNL+K+ Y  K
Sbjct:  112 LVIKVYLKGVHPKFSEGGKMSQYLDSLKIGDVVEFRGPSGLLSYAGKGNFNIQPNKKSPPELRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQAQYPIRFKLWFTLDYP-PEDWTYSKGFVTADMIQEHLPAPAEDVLLLLCGPPPMVQLACHPNLDKLGYSQK 300          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R3_RAT (NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus GN=Cyb5r3 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.174e-43
Identity = 82/187 (43.85%), Postives = 121/187 (64.71%), Query Frame = -3
Query:  203 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPK------FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKH-DRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 742
            LVVK+YFK  HPKFP GG MSQYL+++++G  ++ +GP G + Y G+G F +    K        K + M+AGGTGITP+ Q+++A+LKDP D T  Y+++AN++           +   +H  R K+WY V+K+  + W YS GF+ E ++R+H+P    +TL L CGPPPMIQFA  PNLE++ +
Sbjct:  108 LVVKVYFKDTHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILLRPELEELRNEHSSRFKLWYTVDKA-PDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGPPPMIQFACLPNLERVGH 293          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R2_XENTR (NADH-cytochrome b5 reductase 2 OS=Xenopus tropicalis GN=cyb5r2 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.146e-43
Identity = 84/187 (44.92%), Postives = 120/187 (64.17%), Query Frame = -3
Query:  203 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLV------HGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKH-DRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 742
            L+VK+Y+K VHPKFP GG MSQ+LDSL +G  +D +GP G + Y  +G F +        K K AK + MLAGGTGITP+ Q+++ I +DP D T+  +++AN+T             AK H ++ K+WY +++   +GW+Y  GF+T  +++EH+P  S D + L CGPPPMIQFA Q NL K+ Y
Sbjct:  111 LIVKVYYKNVHPKFPEGGKMSQHLDSLKIGETIDFRGPNGLLVYKEKGKFAIRPDKKSEPKLKVAKHVGMLAGGTGITPMLQLIRQITQDPNDNTKCSLIFANQTEDDILLRYELETVAKSHPEQFKLWYTLDRP-PQGWKYGAGFVTADMIKEHLPPPSEDVVVLMCGPPPMIQFACQDNLTKLGY 296          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R3_MOUSE (NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=Cyb5r3 PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 2.058e-42
Identity = 81/187 (43.32%), Postives = 119/187 (63.64%), Query Frame = -3
Query:  203 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPK------FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 742
            LVVK+YFK  HPKFP GG MSQYL+++ +G  ++ +GP G + Y G+G F +    K        K + M+AGGTGITP+ Q+++A+LKDP D T  Y+++AN++           +   +H  R K+WY V+K+  + W YS GF+ E ++R+H+P    + L L CGPPPMIQFA  PNLE++ +
Sbjct:  108 LVVKVYFKDTHPKFPAGGKMSQYLENMKIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILLRPELEELRNEHSARFKLWYTVDKA-PDAWDYSQGFVNEEMIRDHLPTPGEEPLILMCGPPPMIQFACLPNLERVGH 293          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R3_PIG (NADH-cytochrome b5 reductase 3 (Fragment) OS=Sus scrofa GN=CYB5R3 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.687e-42
Identity = 80/187 (42.78%), Postives = 121/187 (64.71%), Query Frame = -3
Query:  203 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFA------KKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 742
            LV+K+YFK  HPKFP GG MSQYL+S+ +G  ++ +GP G + Y G+G F +    K +      K + M+AGGTGITP+ Q+++AI+KDP+D T  ++++AN+T           +   +H  R K+WY V+++  E W YS GF+ E ++R+H+P    + L L CGPPPMIQ+A  PNLE++ +
Sbjct:   79 LVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDRA-PEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLERVGH 264          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R3_BOVIN (NADH-cytochrome b5 reductase 3 OS=Bos taurus GN=CYB5R3 PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.510e-42
Identity = 80/187 (42.78%), Postives = 120/187 (64.17%), Query Frame = -3
Query:  203 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKP------KFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 742
            LV+K+YFK  HPKFP GG MSQYL+S+ +G  ++ +GP G + Y G+G F +          K  K + M+AGGTGITP+ Q+++AI+KDP+D T  ++++AN+T           +   +H  R K+WY V+K+  E W YS GF+ E ++R+H+P    + L L CGPPPMIQ+A  PNL+++ +
Sbjct:  107 LVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSDPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDKA-PEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDRVGH 292          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R3_HUMAN (NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=CYB5R3 PE=1 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 7.819e-42
Identity = 79/190 (41.58%), Postives = 120/190 (63.16%), Query Frame = -3
Query:  194 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPK------FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNYDTK 742
            LV+K+YFK  HPKFP GG MSQYL+S+ +G  ++ +GP G + Y G+G F +    K        K + M+AGGTGITP+ Q+++AI+KDP+D T  ++++AN+T           +   KH  R K+WY ++++  E W Y  GF+ E ++R+H+P    + L L CGPPPMIQ+A  PNL+ + + T+
Sbjct:  108 LVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRA-PEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTE 296          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R3_CANFA (NADH-cytochrome b5 reductase 3 OS=Canis familiaris GN=CYB5R3 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.021e-41
Identity = 80/187 (42.78%), Postives = 119/187 (63.64%), Query Frame = -3
Query:  203 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKP------KFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 742
            LV+K+YFK  HPKFP GG MSQYL+S+ +G  ++ +GP G + Y G+G F +          K  K + M+AGGTGITP+ Q+++AI+KDP D T  ++++AN+T           +   +H  R K+WY V+K+  E W YS GF+ E ++R+H+P    + L L CGPPPMIQ+A  PNL+++ +
Sbjct:  108 LVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPIIKTVKSVGMIAGGTGITPMLQVIRAIIKDPHDPTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDKA-PEAWDYSQGFVNEEMIRDHLPPPEEEPLILMCGPPPMIQYACLPNLDRVGH 293          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R3_MACFA (NADH-cytochrome b5 reductase 3 OS=Macaca fascicularis GN=CYB5R3 PE=2 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.742e-41
Identity = 78/187 (41.71%), Postives = 120/187 (64.17%), Query Frame = -3
Query:  203 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKP------KFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 742
            LV+K+YFK  HPKFP GG MSQYL+S+ +G  ++ +GP G + Y G+G F +          K  K + M+AGGTGITP+ Q+++AI+KDP+D T  ++++AN+T           +   +H  R K+WY ++++  E W YS GF+ E ++R+H+P    + L L CGPPPMIQ+A  PNL+++ +
Sbjct:  108 LVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTLDRA-PEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDRVGH 293          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NB5R2_HUMAN (NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=CYB5R2 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.619e-41
Identity = 82/196 (41.84%), Postives = 125/196 (63.78%), Query Frame = -3
Query:  176 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVH----GKPK--FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKH-DRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 742
            L++KIYFK VHP++P GG M+QYL+++ +G  +  +GP G + Y G GN  +      +PK   A  L M+AGGTGITP+ Q+++ I KDP D T M +++AN+T           + A+ H D+  +WY +++    GW+YS+GF+T  +++EH+P  +  TL L CGPPP+IQ A  PNLEK+ Y T+D +  +
Sbjct:   83 LIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIFANQTEEDILVRKELEEIARTHPDQFNLWYTLDRP-PIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLEKLGY-TQDMIFTY 276          
The following BLAST results are available for this feature:
BLAST of CN186236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
NB5R1_RAT4.897e-4445.26NADH-cytochrome b5 reductase 1 OS=Rattus norvegicu... [more]
NB5R3_RAT3.174e-4343.85NADH-cytochrome b5 reductase 3 OS=Rattus norvegicu... [more]
NB5R2_XENTR4.146e-4344.92NADH-cytochrome b5 reductase 2 OS=Xenopus tropical... [more]
NB5R3_MOUSE2.058e-4243.32NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=... [more]
NB5R3_PIG2.687e-4242.78NADH-cytochrome b5 reductase 3 (Fragment) OS=Sus s... [more]
NB5R3_BOVIN3.510e-4242.78NADH-cytochrome b5 reductase 3 OS=Bos taurus GN=CY... [more]
NB5R3_HUMAN7.819e-4241.58NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=... [more]
NB5R3_CANFA1.021e-4142.78NADH-cytochrome b5 reductase 3 OS=Canis familiaris... [more]
NB5R3_MACFA1.742e-4141.71NADH-cytochrome b5 reductase 3 OS=Macaca fascicula... [more]
NB5R2_HUMAN6.619e-4141.84NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002J08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186236 ID=CN186236; Name=CN186236; organism=Citrus sinensis; type=EST; length=744bp
GAGGCAAAAGGGAAATTACAGGGCATTCAATTGTTATTGATCGGGGAGAA
TTTATTTATAGACTCTATACAAGAAGAGTGACGCAGTACTTAACTGCTGC
TGAAAACTTCGACGTTTAAATATGTACAACCTCGGCTGGTATCGTCGTCT
GTGCTTGACCCCAGCGTTTAATTTAAAACACCAGCAACGAATCCTTGGTA
TCGTAGTTCATTTTCTCCAAATTCGGCTGCACGGCAAATTGAATCATCGG
AGGAGGCCCACACGCCAATGCAAGAGTATCGCCTGATCCTTCTGGGACGT
GCTCCCTGAGGATTGCTTCTGTAATGAATCCCGTACTGTATTGCCACCCT
TCTTTAATTGATTTCTCTACCACGTACCAAACCTTAACTCTATCGTGCTT
CTTGGCCCAATCATCAAGCTCTTCTCTCAGCAAAATATCATCTTCGGTTC
TGTTCGCATACACCACGTACATCTCTGTTTCATCTTCAGGATCCTTCAGA
ATGGCTTGCATGATTTGATAAATAGGGGTGATTCCTGTGCCGCCAGCTAA
CATAGCCAGCTTCTTAGCAAACTTTGGCTTTCCGTGAACCAAAAAGTTGC
CACGGCCAGTGTATTGAATGTGACCCAATGGACCCTTCACGTCCAGTATG
GATCCCACTGACAGAGAGTCCAAGTACTGCGACATGAGTCCTCCGTTGGG
GAATTTCGGGTGAACTCCTTTGAAATATATTTTGACCACGAGAT
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