CN186236

Overview
NameCN186236
Unique NameCN186236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Aspergillus fumigatus GN=cbr1 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.435e-19
Identity = 55/180 (30.56%), Postives = 93/180 (51.67%), Query Frame = -3
Query:  203 YFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDP-----EDETEMYVVYANRTXXXXXXXXXXXDWAKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 727
            YF  +   +P G + S+YL +L +G  + V+GP G + YT          P   + + M+AGGTGITP+ QI++A++++       D T++ +++AN               A +     ++YV+     +GW    GF+T  +++EH+P  + D   L CGPPPMI  A++   E + Y
Sbjct:  127 YFDLLVKAYPQGNI-SKYLTTLKIGDTMKVRGPKGAMVYT----------PNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDILLKEELDMLAAEDPDFNIYYVLNNP-PQGWTGGVGFVTPEMIKEHLPAPASDVKILLCGPPPMIS-AMKKATESLGY 293          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: MCR1_USTMA (NADH-cytochrome b5 reductase 2 OS=Ustilago maydis GN=MCR1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.448e-19
Identity = 51/158 (32.28%), Postives = 88/158 (55.70%), Query Frame = -3
Query:  239 KFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHV--PEGSGDTLALACGPPPMIQ 706
            K+P GG M+ Y+ S+  G  L +KGP+    Y          K    + + M+AGG+GITP+YQ++Q I  +P D+T++ ++Y+N+T             AKK DR  + Y ++K + +G+    G++TE ++++H+  PE +       CGPPP ++
Sbjct:  173 KYP-GGKMTTYMHSMKPGDKLGIKGPIAKFAY----------KANEFESIGMIAGGSGITPMYQVIQDIASNPSDKTKVTLIYSNKTEQDILLREQFDQLAKKDDRFTIIYGLDK-LPKGFNGFEGYVTEDLVKKHLPQPELADKAKIFVCGPPPQVE 318          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.197e-19
Identity = 55/166 (33.13%), Postives = 84/166 (50.60%), Query Frame = -3
Query:  245 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPM 742
            LVVK Y  GV         +S+Y D L +   ++ KGPLG ++Y              A +L ++AGG+GITP+ Q++Q I+  PED T + ++YAN T             AK++   KV YV+ K     W    G++T   ++ ++P+ + D   L CGPP M
Sbjct:  138 LVVKTYKHGV---------VSKYFDKLKIRQYVEFKGPLGELEYD----------QDTATELGIIAGGSGITPVLQVLQEIIPSPEDLTHISLIYANETEDDILMKSQLDHMAKEYPHFKVHYVIHKP-NGKWNGDVGYVTLEEMKRYLPKQAEDHRLLICGPPKM 283          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NCB5R_LACBS (NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor (strain S238N-H82) GN=MCR1.1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.175e-19
Identity = 59/188 (31.38%), Postives = 99/188 (52.66%), Query Frame = -3
Query:  185 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPE-GSGDTLALACGPPPMIQFAVQPNLEKMNYDTKDSL 742
            L++K Y KG          +S+++ SL +G  L VKGP G+ +YT          P     L M+AGGTG+ P+ QI++AIL++P D T + ++YAN               A  ++ R  ++YV+      GW    GF+T+  +++ +P     ++  L CGPPPM+  A++ NLE++ Y   +++
Sbjct:  132 LIIKTYEKGN---------ISRHVASLKIGDTLRVKGPKGNFKYT----------PGLTAHLGMIAGGTGLAPMIQIVRAILQNPPDRTNITLIYANVNEEDILLRAELDALAMGYESRFNLFYVLNNP-PSGWTGGVGFVTKEHIKDLLPNPNESNSKILICGPPPMVT-AMKKNLEEIKYPVPNTI 298          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.175e-19
Identity = 51/165 (30.91%), Postives = 91/165 (55.15%), Query Frame = -3
Query:  200 GLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWA-KKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNYD 691
            G +S++   L++G  + V+GP G   Y          +P   +++ M+AGGTGI P+YQIM++I  +  D+T++ +VY N+T            +  +K D+ KV+Y+++K+  E W    G+IT   ++E +P  +     L CGPPPM+  +++ N   + Y+
Sbjct:  114 GNISKHFAQLNIGDKIKVRGPKGFYHY----------QPNMNEEIGMIAGGTGIAPMYQIMKSIFANDSDKTKVSLVYGNQTEEDILLKKELDAFVERKPDQFKVYYLLDKA-PEAWTGGVGYITVDTMKERLPAPAEGVQLLVCGPPPMVS-SIKRNAVTLGYE 266          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19
Identity = 55/180 (30.56%), Postives = 93/180 (51.67%), Query Frame = -3
Query:  203 YFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDP-----EDETEMYVVYANRTXXXXXXXXXXXDWAKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNLEKMNY 727
            YF  +   +P G + S++L +L +G  + V+GP G + YT          P   + + M+AGGTGITP+ Q+++AI+K        D T++ +++AN               AK+ D  +++YV+     E W    GF+T  +++  +P  +GD   L CGPPPM+  A++   E + Y
Sbjct:  126 YFDLLVKSYPQGNI-SKHLTTLRIGDKMKVRGPKGAMVYT----------PNMVRHIGMIAGGTGITPMLQVIKAIIKGRPRNGGNDTTQIDLIFANVNPDDILLKEELDQLAKEDDAFRIYYVLNNP-PEKWNGGVGFVTPDMIKAKLPAPAGDIKVLICGPPPMVS-AMKKATESLGY 292          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: MCR1_CANAL (NADH-cytochrome b5 reductase 2 OS=Candida albicans GN=MCR1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = -3
Query:  218 NGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKH-DRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNL 697
            +GG MS ++  L  G  L  KGP+   ++          +P   K +A++ GGTGITP+YQ++  I  +P+D T++ ++Y N T             A KH D+VKV Y V+K+ ++ W+   GFIT+  L++ + +   D     CGPP + +    P +
Sbjct:  126 DGGKMSSHIFDLKEGETLSFKGPIVKWKW----------EPNQFKSIALIGGGTGITPLYQLLHQITSNPKDNTKVNLIYGNLTPEDILLKKEIDAIASKHKDQVKVHYFVDKADEKKWEGQIGFITKEFLQKELEKPGSDFKVFVCGPPGLYKAISGPKV 276          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NCB5R_VANPO (NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 48/151 (31.79%), Postives = 86/151 (56.95%), Query Frame = -3
Query:  242 GLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDW-AKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMI 691
            G +S+   SL +G  +DV+GP G  +YT R +          K LAM+AGG+G+TP+YQI+++I ++P+D+T++  +Y N              + A K  ++ + Y+++K   E W+  +G++T  +++E +P  +     L CGP PM+
Sbjct:  118 GKISKMFTSLKIGDTIDVQGPKGFYEYTDRSS----------KHLAMIAGGSGLTPMYQIIKSIAENPKDKTKVTFIYGNVEEIDILLRDDLDKFAASKPGQITIHYLLDKP-SENWKGGSGYVTPELMKEKLPAPADGVQLLVCGPLPMV 257          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: NCB5R_NEUCR (NADH-cytochrome b5 reductase 1 OS=Neurospora crassa GN=cbr-1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = -3
Query:  242 YFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE--DETEMYVVYANRTXXXXXXXXXXXDWAKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMI 727
            YF  +   +P G + S+++ SL VG  + VKGP G   YT          P   +   M+AGGTGITP+ Q+++AI++     D TE+ +++AN T               +   ++V YV+++   EGW    GF+T+ ++ + +P+ + D   L CGPPPMI
Sbjct:  131 YFDLLIKSYPTGNI-SKHMASLQVGQTIRVKGPKGAFVYT----------PNMVRHFGMVAGGTGITPMLQVIRAIVRGRAAGDRTEVDLIFANVTAQDILLKEDLDALVAQDKGIRVHYVLDRP-PEGWTGGVGFVTQEMVEKLLPKPASDVKILLCGPPPMI 282          
BLAST of CN186236 vs. ExPASy Swiss-Prot
Match: YMM5_YEAST (Uncharacterized oxidoreductase YML125C OS=Saccharomyces cerevisiae GN=YML125C PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = -3
Query:  227 LVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXDWAKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQ 742
            LVVK Y  G          +S+Y   L+ G  +D KGP+G + Y          +P  +K L ++AGG+GITP+ QI+  I+  PED T++ ++YAN T           + A+K+   +V YVV     + W    G+IT+  +  ++PE S D   L CGP  M   A+Q
Sbjct:  138 LVVKAYVDGK---------VSKYFAGLNSGDTVDFKGPIGTLNY----------EPNSSKHLGIVAGGSGITPVLQILNEIITVPEDLTKVSLLYANETENDILLKDELDEMAEKYPHFQVHYVVHYP-SDRWTGDVGYITKDQMNRYLPEYSEDNRLLICGPDGMNNLALQ 289          
The following BLAST results are available for this feature:
BLAST of CN186236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
NCB5R_ASPFU1.435e-1930.56NADH-cytochrome b5 reductase 1 OS=Aspergillus fumi... [more]
MCR1_USTMA2.448e-1932.28NADH-cytochrome b5 reductase 2 OS=Ustilago maydis ... [more]
YMI7_YEAST3.197e-1933.13Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
NCB5R_LACBS4.175e-1931.38NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor... [more]
NCB5R_KLULA4.175e-1930.91NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
NCB5R_COCIM5.453e-1930.56NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
MCR1_CANAL7.121e-1931.68NADH-cytochrome b5 reductase 2 OS=Candida albicans... [more]
NCB5R_VANPO1.215e-1831.79NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma ... [more]
NCB5R_NEUCR1.215e-1832.93NADH-cytochrome b5 reductase 1 OS=Neurospora crass... [more]
YMM5_YEAST1.586e-1833.72Uncharacterized oxidoreductase YML125C OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002J08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186236 ID=CN186236; Name=CN186236; organism=Citrus sinensis; type=EST; length=744bp
GAGGCAAAAGGGAAATTACAGGGCATTCAATTGTTATTGATCGGGGAGAA
TTTATTTATAGACTCTATACAAGAAGAGTGACGCAGTACTTAACTGCTGC
TGAAAACTTCGACGTTTAAATATGTACAACCTCGGCTGGTATCGTCGTCT
GTGCTTGACCCCAGCGTTTAATTTAAAACACCAGCAACGAATCCTTGGTA
TCGTAGTTCATTTTCTCCAAATTCGGCTGCACGGCAAATTGAATCATCGG
AGGAGGCCCACACGCCAATGCAAGAGTATCGCCTGATCCTTCTGGGACGT
GCTCCCTGAGGATTGCTTCTGTAATGAATCCCGTACTGTATTGCCACCCT
TCTTTAATTGATTTCTCTACCACGTACCAAACCTTAACTCTATCGTGCTT
CTTGGCCCAATCATCAAGCTCTTCTCTCAGCAAAATATCATCTTCGGTTC
TGTTCGCATACACCACGTACATCTCTGTTTCATCTTCAGGATCCTTCAGA
ATGGCTTGCATGATTTGATAAATAGGGGTGATTCCTGTGCCGCCAGCTAA
CATAGCCAGCTTCTTAGCAAACTTTGGCTTTCCGTGAACCAAAAAGTTGC
CACGGCCAGTGTATTGAATGTGACCCAATGGACCCTTCACGTCCAGTATG
GATCCCACTGACAGAGAGTCCAAGTACTGCGACATGAGTCCTCCGTTGGG
GAATTTCGGGTGAACTCCTTTGAAATATATTTTGACCACGAGAT
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