CN186223

Overview
NameCN186223
Unique NameCN186223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYE-VDFSEK 749
            DL+K+PYL+AVI E LR       ++PH    D  L G+ IP ++ +      +  +P  W+ P  F+PERF+ +ES         ++  G+ + + +PFGVGRR CPG+ LA+  L   +  LV  FE     G + VD +EK
Sbjct:  350 DLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEES--------KVEANGN-DFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEK 484          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15
Identity = 59/162 (36.42%), Postives = 76/162 (46.91%), Query Frame = -1
Query:  270 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY---EVDFSEKQEFTTVMKNPLRARISP 746
            L  + Y+K VI E LR +P    +LPH   E   + G+ I +   V      M R P+ W+D   F PERF   E G         D  GSR  + +PFG GRR CPG   AM  LE  VA L++ F+W   DG    ++D       T   KN L+   SP
Sbjct:  344 LENLSYMKLVIKETLRLNPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERF---EDG-------TADFKGSR-FEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLVASP 494          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP1A2_PONAB (Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.355e-15
Identity = 51/141 (36.17%), Postives = 72/141 (51.06%), Query Frame = -1
Query:  327 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFS 749
            D  ++PYLKA ILE  R      F +PH+ T D TL+G  IPK+  V     ++  DP++WEDP  F PERF+           +   I      K+M FG+G+R C G  LA   +  F+A L+   E+    G +VD +
Sbjct:  361 DRPQLPYLKAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKECCVFVNQWQVNHDPELWEDPSEFWPERFL---------TTDGTAINKPLSEKVMLFGMGKRRCIGEVLANWEVFLFLAILLQQLEFSVPPGVKVDLT 492          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.355e-15
Identity = 46/138 (33.33%), Postives = 71/138 (51.45%), Query Frame = -1
Query:  336 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEV 749
            DL+++ Y K V+ E  R HP    +LP        + G+ IP    +   +  + RDPK+W +P  F P+RF+ D S         +D  G    +++PFG GRRICPG+ L +  +E  + NL++ F+W    G  V
Sbjct:  351 DLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFL-DSS---------IDYRG-LNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNV 477          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.770e-15
Identity = 53/144 (36.81%), Postives = 75/144 (52.08%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY-EVDFSEK 749
            DL K+PYL+AVI E LR       ++PH    D  L G  IP ++ +      +  +P +W+ P  F+PERF+ +E     A VE        + + +PFGVGRR CPG+ LA+  L   +  LV  FE     G  ++D SEK
Sbjct:  350 DLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEE-----AHVE----ANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEK 484          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP1A5_CHICK (Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.770e-15
Identity = 46/141 (32.62%), Postives = 70/141 (49.65%), Query Frame = -1
Query:  327 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFS 749
            D   +PY +A ILE  R      F +PH+ T D  L+G+ IPKD  V     ++  D K+W+DP AF PERF+           E  ++      K+M FG+G+R C G  +    +  F++ L+   E+   DG + D +
Sbjct:  370 DRGMLPYTEAFILEMFRHSSFMPFTIPHSTTRDTVLNGYYIPKDRCVFINQWQVNHDEKLWKDPQAFNPERFLN---------AEGTEVNKVDAEKVMTFGLGKRRCIGENIGKWEVFLFLSTLLQQLEFSIQDGKKADMT 501          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.770e-15
Identity = 53/157 (33.76%), Postives = 76/157 (48.41%), Query Frame = -1
Query:  288 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY---EVDFSEKQEFTTVMKNPL 749
            DL ++ YLK+VI E LR HPP   + P        +DG+ IP    V      +GRDP+ W D   F PERF  D S         +D  G+   + +PFG GRR+CPG+   +  +   +A L++ F W+  +     ++D  E    T   KN L
Sbjct:  350 DLEELSYLKSVIKETLRLHPPSQLI-PRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERF-NDSS---------IDFKGN-SFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKL 494          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.770e-15
Identity = 58/158 (36.71%), Postives = 76/158 (48.10%), Query Frame = -1
Query:  288 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWE-DPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK---AADGYEVDFSEKQEFTTVMKNPL 749
            ++  M YLKAVI EGLR HPP   ++   +T+D  L G+ I     V      + RD   W  D   F+PER +             LD  G+   + +PFG GRRICPG+G AM  +E  +ANLV  F W+      G E D +E        K PL
Sbjct:  343 EVEDMKYLKAVIKEGLRLHPPFPLLVLRLLTQDVKLKGYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHLDSP----------LDFRGTN-FEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPL 489          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY-EVDFSEK 749
            DL+K+PYL+AV+ E LR       ++PH    D  L G+ IP ++ +      +  +P  W+ P  F+PERF  +ES         ++  G+ + + +PFGVGRR CPG+ LA+  L   +  +V  FE     G  +VD SEK
Sbjct:  350 DLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEES--------HVEANGN-DFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEK 484          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15
Identity = 56/162 (34.57%), Postives = 78/162 (48.15%), Query Frame = -1
Query:  270 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY---EVDFSEKQEFTTVMKNPLRARISP 746
            ++ + Y+K VI E +R +P    ++PH   E   + G+ + +   V      M R P+ W+D   FKPERF   E G         D  GSR  + +PFG GRR CPG    M+ LE  VA L++ F+W    G    +VD       TT  KN L+   SP
Sbjct:  374 IDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERF---EDG-------MADYKGSR-FEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSLPAGMQPDDVDMDFVVTATTRRKNHLQLVASP 524          
The following BLAST results are available for this feature:
BLAST of CN186223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TCMO_ZINEL1.038e-1536.11Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
C99A3_ORYSJ1.038e-1536.42Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
CP1A2_PONAB1.355e-1536.17Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2... [more]
C71B7_ARATH1.355e-1533.33Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_PEA1.770e-1536.81Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
CP1A5_CHICK1.770e-1532.62Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=... [more]
C71D8_SOYBN1.770e-1533.76Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71AF_ARATH1.770e-1536.71Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ARATH3.019e-1535.42Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C99A2_ORYSJ3.019e-1534.57Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186223 ID=CN186223; Name=CN186223; organism=Citrus sinensis; type=EST; length=779bp
GCTCTGAATAGTGGATCCCCCGGTTTTTTTTTTTCGCATCCCCTTTCATA
TCTAAACTTTGGAAAAATTGACATACATATCCTAAATCCTCTCCACGAAA
GGAGGAGATGAGTTAGTAATATTGGGCATCCATTACCTTGGTCAAATTCA
TAGATTTGACCACCCACTCGCCTATTGGTTAACACCTCGTATGGTTGTAA
AATTTATCACCAATTAAGGAGTACAGCTTATTTCGAAATAAACTTAGGGA
AATCCTCTTGGCTAATTCTTGGAGAAATACGAGCCCGTAATGGATTTTTC
ATCACAGTAGTGAACTCCTGCTTCTCCGAAAAATCAACTTCATATCCATC
CGCAGCCTTCCACTCAAAGCACCAAACCAAATTAGCCACAAAATATTCCA
AGTGAAGCATAGCCAAACCAAGCCCCGGACAAATCCTCCTCCCAACACCA
AACGGCATCATCTTAATTTCCCTACTCCCTGTTATATCCAAATCTTCAAC
TACAGCTACTCTTCCACCGCTTTCATCCCTGACGAACCTCTCAGGCTTGA
ATGCCATCGGATCCTCCCAAACCTTCGGGTCCCGACCCATTTCGGCTACC
ATGAAATTGACGCTTGCATCTTTGGGTATCACGTGTCCATCCAATGTGAA
ATCCTCTGTCACGGCATGCGGCAGCACAAAGTGCCCTGGAGGATGCCTTC
TTAGTCCCTCCAAGATCACTGCTTTCAGATACGGCATCTTGTTCAAGTCT
TCTTCTTTCACCTCTTCTTCCTCTCCATT
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