CN186223

Overview
NameCN186223
Unique NameCN186223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15
Identity = 43/130 (33.08%), Postives = 68/130 (52.31%), Query Frame = -1
Query:  360 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEW 749
            DLN++ Y K ++ E  R HP    +LP        + G+ IP    +      + RDPK+W +P  F P+RF+ D S         +D  G    +++PFG GRRICPG+ + +  +E  + NL++ F+W
Sbjct:  345 DLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFL-DSS---------IDYRG-LNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDW 463          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.943e-15
Identity = 51/144 (35.42%), Postives = 75/144 (52.08%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY-EVDFSEK 749
            D+ K+PYL+AV+ E LR       ++PH    D  L G+ IP ++ +      +  +P  W+ P  F+PERF  +ES     +VE        + + +PFGVGRR CPG+ LA+  L   +  LV  FE     G  ++D SEK
Sbjct:  351 DIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEES-----LVE----ANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEK 485          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP1A2_CAVPO (Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.943e-15
Identity = 51/164 (31.10%), Postives = 78/164 (47.56%), Query Frame = -1
Query:  258 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPRISQ 749
            D  ++PY++A ILE  R      F +PH  T D  L+G  IPKD  V     ++  DPK WEDP  F+PERF+         +  +  +  +   K++ FG+G+R C G  L    +  F+A L+   E+    G +VD +     T    +    +  PR S+
Sbjct:  361 DRPQLPYMEAFILEVFRYSSFLPFTIPHCTTRDTILNGFYIPKDRCVFINQWQVNHDPKQWEDPFEFRPERFL---------LANNTAVDKTLSDKILLFGLGKRRCIGETLGRWEVFLFLAILLQQLEFSVPPGVKVDLTPVYGLTMKPPHCQHVQARPRFSK 515          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.943e-15
Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = -1
Query:  333 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW-EDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVD 749
            D+  +PY +A++ E LR  P    ++P A  +D  + G+ IP   +VN     + RD K W  +P  F+PERF+  E          +D  G+ + + +PFG GRR+CPG+ L    LE   ANL+  F +K  +G + D
Sbjct:  346 DVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKE----------VDFKGT-DYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPD 474          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG-YEVDFSEK 749
            D  K+PYL+AVI E LR        LPH    D  L G+ IP ++ +      +  +P+ W+ P  F+PERF+ +ES         ++  G+ + + +PFGVGRR CPG+ LA+  L   +  LV  FE     G  ++D SEK
Sbjct:  350 DTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEES--------KVEANGN-DFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEK 484          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP1A4_CHICK (Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 46/151 (30.46%), Postives = 72/151 (47.68%), Query Frame = -1
Query:  297 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMK 749
            D   +PY +A ILE  R      F +PH  T+D  L+G+ IPKD  V     +   D K+W+DP +FKPERF+              +++ +   K++ FG+G+R C G  +    +  F+  ++   E   A G  VD + +   T   K
Sbjct:  372 DRGMLPYTEAFILEAFRHSSLLPFTIPHCTTKDTVLNGYYIPKDTCVFINQWQANHDEKIWKDPPSFKPERFLN---------AAGTELSRTEADKVLIFGLGKRRCIGESIGRWEVFLFLTTILQQLEISLAPGQRVDITPQYGLTMKYK 513          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 53/154 (34.42%), Postives = 79/154 (51.30%), Query Frame = -1
Query:  288 KMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEW---KAADGYEVDFSEKQEFTTVMKNPL 740
            ++ YLKA I E LR HPPG  V      +   ++G+ IP  ++V      +G D K W +P  F PERF+ D S         +D  G+   + +PFG GRRICPG+   M ++E  +A L++ F+W   K     ++D +E+   T   K  L
Sbjct:  336 ELKYLKAFINEVLRLHPPGPLVFREC-RQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFI-DSS---------IDYKGTN-FEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDL 477          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 55/157 (35.03%), Postives = 77/157 (49.04%), Query Frame = -1
Query:  288 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY---EVDFSEKQEFTTVMKNPL 749
            +L  M  LKAVI E LR HPP   +LPH   +   + G+ IP +  V      +GR    WE    F PERF+  +  G V    DL      E + + FG GRR+CPG+  A   +E  ++NL++ F+W+   G    +VD +E    T   K  L
Sbjct:  382 NLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGV----DLK---PNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKL 531          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 50/144 (34.72%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY-EVDFSEK 749
            D+ K+PYL+AV+ E LR       ++PH    D  L G+ IP ++ +      +  +P  W+ P  F+PERF  +ES         ++  G+ + + +PFGVGRR CPG+ LA+  L   +  LV  FE     G  ++D SEK
Sbjct:  350 DIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEES--------HVEANGN-DFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEK 484          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY-EVDFSEK 749
            D+ K+PYL+AVI E LR       ++PH    D  L G+ IP ++ +      +  +P  W  P  F+PERF+ +ES         ++  G+ + K +PFGVGRR CPG+ LA+  L   +  LV  FE     G  ++D +EK
Sbjct:  351 DVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEES--------KVEANGN-DFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEK 485          
The following BLAST results are available for this feature:
BLAST of CN186223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
C71BS_ARATH3.019e-1533.08Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN3.943e-1535.42Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
CP1A2_CAVPO3.943e-1531.10Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 P... [more]
C83A1_ARATH3.943e-1534.29Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_CATRO5.150e-1536.11Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
CP1A4_CHICK5.150e-1530.46Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=... [more]
C71DB_LOTJA5.150e-1534.42Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71C4_MAIZE5.150e-1535.03Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
TCMO_PHAAU6.726e-1534.72Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PETCR6.726e-1535.42Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186223 ID=CN186223; Name=CN186223; organism=Citrus sinensis; type=EST; length=779bp
GCTCTGAATAGTGGATCCCCCGGTTTTTTTTTTTCGCATCCCCTTTCATA
TCTAAACTTTGGAAAAATTGACATACATATCCTAAATCCTCTCCACGAAA
GGAGGAGATGAGTTAGTAATATTGGGCATCCATTACCTTGGTCAAATTCA
TAGATTTGACCACCCACTCGCCTATTGGTTAACACCTCGTATGGTTGTAA
AATTTATCACCAATTAAGGAGTACAGCTTATTTCGAAATAAACTTAGGGA
AATCCTCTTGGCTAATTCTTGGAGAAATACGAGCCCGTAATGGATTTTTC
ATCACAGTAGTGAACTCCTGCTTCTCCGAAAAATCAACTTCATATCCATC
CGCAGCCTTCCACTCAAAGCACCAAACCAAATTAGCCACAAAATATTCCA
AGTGAAGCATAGCCAAACCAAGCCCCGGACAAATCCTCCTCCCAACACCA
AACGGCATCATCTTAATTTCCCTACTCCCTGTTATATCCAAATCTTCAAC
TACAGCTACTCTTCCACCGCTTTCATCCCTGACGAACCTCTCAGGCTTGA
ATGCCATCGGATCCTCCCAAACCTTCGGGTCCCGACCCATTTCGGCTACC
ATGAAATTGACGCTTGCATCTTTGGGTATCACGTGTCCATCCAATGTGAA
ATCCTCTGTCACGGCATGCGGCAGCACAAAGTGCCCTGGAGGATGCCTTC
TTAGTCCCTCCAAGATCACTGCTTTCAGATACGGCATCTTGTTCAAGTCT
TCTTCTTTCACCTCTTCTTCCTCTCCATT
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