CN186223

Overview
NameCN186223
Unique NameCN186223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP2K4_ONCMY (Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2k4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.454e-11
Identity = 45/139 (32.37%), Postives = 60/139 (43.17%), Query Frame = -1
Query:  333 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVD 749
            D   +PY  AVI E  R        +PH  + D T  G+ I K  SV  ++  + +D   WE P  F P  F+ DE GG V           +    M F  GRR+C G GLA + L  F  +L+  F +    G   D
Sbjct:  353 DRKNLPYTDAVIHETQRLANISPMAVPHTTSRDVTFQGYFIKKGTSVIPLLMSVLQDDNEWESPNTFNPSHFL-DEQGGFV-----------KRDAFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTED 479          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.512e-11
Identity = 44/162 (27.16%), Postives = 71/162 (43.83%), Query Frame = -1
Query:  264 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPRI 749
            D   +PYL+A I E LR  P    ++PH    D  +  + + K   V   +  +  D K W++P  F PERF+ +E                  +  +PFG G R+C G  LA L L  F++ ++  F  +   G  +   E Q    V+  P + ++  R+
Sbjct:  349 DRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERFLNEEGNSLCC----------PSLSYLPFGAGVRVCLGEALAKLELFLFLSWILQRFTLEVPGGQPL--PELQGKFRVVLQPQKYKVIARL 498          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.512e-11
Identity = 42/118 (35.59%), Postives = 58/118 (49.15%), Query Frame = -1
Query:  384 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVA 737
            +PYL+A I EGLR  P    ++PH    D ++  + IPK A V   +  +  D K W+ P  F P RF+ DE G  +          S     +PFG G R+C G  LA + L  F+A
Sbjct:  353 LPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRFL-DEQGQHI---------HSPSPSYLPFGAGIRVCLGEVLAKMELFLFLA 460          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C356_FUNHE (Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=cyp3a56 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.892e-11
Identity = 48/160 (30.00%), Postives = 73/160 (45.62%), Query Frame = -1
Query:  267 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPR 746
            L +M YL  VI E LR  P     L         ++G VIPKD  V      + RDP++W +P AFKPERF +          +++D         MPFG G R C G+  A++ ++  V  ++  + +      EV F    +     K P++ ++ PR
Sbjct:  349 LMEMEYLDCVINESLRLFPIAAR-LERVAKAAVEINGIVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNK-------DNID-----PYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPFEMDIQGLLAPKRPIQLKLVPR 495          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C330_FUNHE (Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=cyp3a30 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.892e-11
Identity = 48/160 (30.00%), Postives = 73/160 (45.62%), Query Frame = -1
Query:  267 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPR 746
            L +M YL  VI E LR  P     L         ++G VIPKD  V      + RDP++W +P AFKPERF +          +++D         MPFG G R C G+  A++ ++  V  ++  + +      EV F    +     K P++ ++ PR
Sbjct:  349 LMEMEYLDCVINESLRLFPIAAR-LERVAKAAVEINGVVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNK-------DNID-----PYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPFEMDIQGLLAPKRPIQLKLVPR 495          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 41/135 (30.37%), Postives = 67/135 (49.63%), Query Frame = -1
Query:  345 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG 749
            D   + Y +A I E LR  P    ++PH   ++ ++  + IPK+A V   +  +  D K W +P  F P+RF+ DE+G RV          S     +PFG G R+C G  LA + +  F++ ++  F  +  +G
Sbjct:  359 DRKILHYTEAAISEVLRIRPVSPLLIPHVALKESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHLFSPDRFL-DENGNRVY---------SPSPSFLPFGAGIRVCLGEALAKMEVFLFLSWILQRFTLEVPEG 483          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 49/170 (28.82%), Postives = 74/170 (43.53%), Query Frame = -1
Query:  252 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSR----EIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPRISQED 749
            D N +  L+A I E LR  P    ++PH    D ++    IPKD  V   +  +  + K W+ P  F PERF              LD TGS      +  +PFG G R C G  LA   L  +VA L+  F+    DG  +   +       + +P + +++ R + +D
Sbjct:  344 DRNHLLMLEATIREVLRIRPVAPMLIPHKANIDSSIGEFTIPKDTHVVINLWALHHNEKEWDQPDRFMPERF--------------LDATGSHLITPSLSYLPFGAGPRACIGEVLARQVLFLYVACLLQRFDLDVPDGAPMPCLKGDPKVVFLIDPFKVKVTVRQAWKD 499          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: CP120_SYNY3 (Putative cytochrome P450 120 OS=Synechocystis sp. (strain PCC 6803) GN=cyp120 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 45/140 (32.14%), Postives = 63/140 (45.00%), Query Frame = -1
Query:  333 LNKMPYLKAVILEGLRRHPP--GHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVD 746
            L KMPYL  V+ E LR  PP  G F     + +D    G   PK   V++ +++   DP ++ DP  F PERF  D S            T +     +PFG G R C G   A L ++ F   L+  F+W    G  ++
Sbjct:  298 LKKMPYLDQVLQEVLRLIPPVGGGF---RELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSA-----------THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLE 423          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C516A_DICDI (Probable cytochrome P450 516A1 OS=Dictyostelium discoideum GN=cyp516a1 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 44/144 (30.56%), Postives = 67/144 (46.53%), Query Frame = -1
Query:  312 NKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEF 743
            +K P+  A I E LR  P G   LP   +ED T   + I K + +   V  +  DP VWEDP  F P R++              DI+ S     +PFG G R+C G  LA   +   + N++  + +++ +G  +  +EK  F
Sbjct:  343 SKTPFFNACIKEALRIRPVGALSLPRIASEDVTCGPYTIEKGSQIIMNVYGLAMDPTVWEDPETFNPYRWLSS------------DISQS-TYSFIPFGCGSRVCVGSSLARDEIFLGIGNILLNYIFESQNGKPI--NEKGHF 471          
The following BLAST results are available for this feature:
BLAST of CN186223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
CP2K4_ONCMY3.454e-1132.37Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP17A_ICTPU4.512e-1127.16Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
CP17A_CHICK4.512e-1135.59Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
C356_FUNHE5.892e-1130.00Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=c... [more]
C330_FUNHE5.892e-1130.00Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=c... [more]
CP17A_RANDY7.696e-1130.37Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
CP17A_PERLE7.696e-1128.82Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]
CP120_SYNY37.696e-1132.14Putative cytochrome P450 120 OS=Synechocystis sp. ... [more]
C516A_DICDI7.696e-1130.56Probable cytochrome P450 516A1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186223 ID=CN186223; Name=CN186223; organism=Citrus sinensis; type=EST; length=779bp
GCTCTGAATAGTGGATCCCCCGGTTTTTTTTTTTCGCATCCCCTTTCATA
TCTAAACTTTGGAAAAATTGACATACATATCCTAAATCCTCTCCACGAAA
GGAGGAGATGAGTTAGTAATATTGGGCATCCATTACCTTGGTCAAATTCA
TAGATTTGACCACCCACTCGCCTATTGGTTAACACCTCGTATGGTTGTAA
AATTTATCACCAATTAAGGAGTACAGCTTATTTCGAAATAAACTTAGGGA
AATCCTCTTGGCTAATTCTTGGAGAAATACGAGCCCGTAATGGATTTTTC
ATCACAGTAGTGAACTCCTGCTTCTCCGAAAAATCAACTTCATATCCATC
CGCAGCCTTCCACTCAAAGCACCAAACCAAATTAGCCACAAAATATTCCA
AGTGAAGCATAGCCAAACCAAGCCCCGGACAAATCCTCCTCCCAACACCA
AACGGCATCATCTTAATTTCCCTACTCCCTGTTATATCCAAATCTTCAAC
TACAGCTACTCTTCCACCGCTTTCATCCCTGACGAACCTCTCAGGCTTGA
ATGCCATCGGATCCTCCCAAACCTTCGGGTCCCGACCCATTTCGGCTACC
ATGAAATTGACGCTTGCATCTTTGGGTATCACGTGTCCATCCAATGTGAA
ATCCTCTGTCACGGCATGCGGCAGCACAAAGTGCCCTGGAGGATGCCTTC
TTAGTCCCTCCAAGATCACTGCTTTCAGATACGGCATCTTGTTCAAGTCT
TCTTCTTTCACCTCTTCTTCCTCTCCATT
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