CN186223

Overview
NameCN186223
Unique NameCN186223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.810e-18
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = -1
Query:  288 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMKNPL 749
            DL  + Y+K VI E  R H P   ++P     +F + G+ I     ++     +GR+P VW+DP  F PERFV          VE    T     +++PFG GRR CP + + +  +EY +ANL++ F+WKA +  EV   E    T+  K+PL
Sbjct:  351 DLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSN-------VE----TKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKATE--EVSVEEAPGLTSHRKHPL 491          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.977e-18
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = -1
Query:  357 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 749
            DL+++ YLK +I E LR HP    ++P   T D  + G+ IP    V      +GRDPK WE+   F PERFV +           +D  G ++ +++PFG GRR CPG+   +  +E  +ANL++ F W+
Sbjct:  348 DLHQLHYLKLIIKETLRLHPVAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNN----------SVDFKG-QDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWE 467          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.500e-18
Identity = 56/165 (33.94%), Postives = 84/165 (50.91%), Query Frame = -1
Query:  264 DLNKMPYLKAVILEGLRRHPPGHFVLP-HAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWED-PMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAA-DGYEVDFSEKQEFTTVMKNPLRARISPRI 749
            D+  +PYL+A+  E  R+HP     LP + +     ++G+ IPK   +N  +  +GRDP VW D P  F PERF+     GR A ++          +++PFG GRRIC G  + +L +EY +  LV  F+WK      E++  E          PL A + PR+
Sbjct:  353 DIPNLPYLQAICKETFRKHPSTPLNLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLY----GRNAKIDPR----GNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAMVIPRL 509          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.500e-18
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = -1
Query:  321 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAA-DGYEVDFSEK 749
            D+ KM YLKAV+ E +R H P   ++P     D  + G+ +P    V      +GRDP  W++P  F+PERF+             +D  G  + +++PFG GRR CPG    M  LE+ +ANL+  F+W+   +  E+D SE+
Sbjct:  352 DIEKMHYLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLN----------SSVDFKG-LDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSER 484          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.489e-18
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -1
Query:  324 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW-EDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSE 749
            D+  M YLKAV+ E LR HPP   ++PH  T+D  L  + IP    V   +  +GR+   W  D   F+PER +   S  R            ++ +++PFG GRR+CPG+  A++  E  +ANLV  F+W++ D  E D +E
Sbjct:  333 DIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFR-----------GQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDD-ETDVAE 463          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.109e-17
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = -1
Query:  354 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKA 746
            L+++ YL+AVI E LR HPP   +LP    E   + G+ IP  + V      +GRDP  W +P  F P+RF+  +          +D  G+   + +PFG GRRICPG+  A+ ++E  +A L++ F+W++
Sbjct:  342 LHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESK----------VDFKGN-SFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQS 461          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.448e-17
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = -1
Query:  351 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAA 749
            DLN++ Y K V+ E LR HP    +LP        + G+ +P    +   V  MGRDPK+WE+   F P+RF+ D S         +D  G +  + +PFG GRRICPG+ +  + +E  + NL++ F+W  A
Sbjct:  345 DLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFL-DSS---------VDFKG-KNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGLA 466          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17
Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = -1
Query:  261 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGY-EVDFSEK-QEFTTVMKNPLRARISPRIS 749
            D +K+PYL+AVI E LR       ++PH    D  L G+ IP ++ +      +  +P  W+DP  F+PERF+ +ESG     VE        + + +PFGVGRR CPG+ LA+  L   +  +V  FE     G  ++D SEK  +F+  + N     + PR S
Sbjct:  350 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESG-----VE----ANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGGQFSLFILNHSTIVLKPRSS 505          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17
Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = -1
Query:  345 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG 737
            + YLK+V+ E LR HPP   +LP    +   ++G+ IP  + V      +GRDP++W +   F PERF+      +           S   + +PFG GRR+CPGL   + ++EY +A L++ F+WK   G
Sbjct:  346 LKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYK-----------SNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKG 465          
BLAST of CN186223 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17
Identity = 55/163 (33.74%), Postives = 83/163 (50.92%), Query Frame = -1
Query:  273 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW-EDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFSEKQEFTTVMKN---PLRARIS 749
            D+  M YLKAVI E +R HPP   ++PH  T+D  L  + IP    V      +GR+   W  D   F+PER +             +D  G    +++PFG GRRICP +  A++ +E  +ANLV  ++W+  + Y  D +   E T ++ +   PL A +S
Sbjct:  336 DIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLN----------SSVDFRG-HNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPLYAIVS 487          
The following BLAST results are available for this feature:
BLAST of CN186223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
C71B6_ARATH3.810e-1835.06Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71A1_PERAE4.977e-1836.64Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C75A4_GENTR6.500e-1833.94Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71A8_MENPI6.500e-1835.42Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71AN_ARATH8.489e-1836.36Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO1.109e-1735.88Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BF_ARATH1.448e-1736.09Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
TCMO_RUTGR3.226e-1735.15Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C71D9_SOYBN3.226e-1734.35Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71AM_ARATH4.213e-1733.74Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002I23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186223 ID=CN186223; Name=CN186223; organism=Citrus sinensis; type=EST; length=779bp
GCTCTGAATAGTGGATCCCCCGGTTTTTTTTTTTCGCATCCCCTTTCATA
TCTAAACTTTGGAAAAATTGACATACATATCCTAAATCCTCTCCACGAAA
GGAGGAGATGAGTTAGTAATATTGGGCATCCATTACCTTGGTCAAATTCA
TAGATTTGACCACCCACTCGCCTATTGGTTAACACCTCGTATGGTTGTAA
AATTTATCACCAATTAAGGAGTACAGCTTATTTCGAAATAAACTTAGGGA
AATCCTCTTGGCTAATTCTTGGAGAAATACGAGCCCGTAATGGATTTTTC
ATCACAGTAGTGAACTCCTGCTTCTCCGAAAAATCAACTTCATATCCATC
CGCAGCCTTCCACTCAAAGCACCAAACCAAATTAGCCACAAAATATTCCA
AGTGAAGCATAGCCAAACCAAGCCCCGGACAAATCCTCCTCCCAACACCA
AACGGCATCATCTTAATTTCCCTACTCCCTGTTATATCCAAATCTTCAAC
TACAGCTACTCTTCCACCGCTTTCATCCCTGACGAACCTCTCAGGCTTGA
ATGCCATCGGATCCTCCCAAACCTTCGGGTCCCGACCCATTTCGGCTACC
ATGAAATTGACGCTTGCATCTTTGGGTATCACGTGTCCATCCAATGTGAA
ATCCTCTGTCACGGCATGCGGCAGCACAAAGTGCCCTGGAGGATGCCTTC
TTAGTCCCTCCAAGATCACTGCTTTCAGATACGGCATCTTGTTCAAGTCT
TCTTCTTTCACCTCTTCTTCCTCTCCATT
back to top