CN186207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_ALISL (GTP cyclohydrolase-2 OS=Aliivibrio salmonicida (strain LFI1238) GN=ribA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.766e-17 Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = -3 Query: 378 AAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYGLE 734 A G+++YLR EGRGIGL +KL AY LQ G +T EAN LG D R++ AQML L + T+KL+TNNP K ++ YG+ + V +KK N+ YL+ +K+ H + L+ Sbjct: 82 AISGGIILYLR-QEGRGIGLYNKLDAYELQSKGMNTYEANNHLGFGDDLRDFKEAAQMLGALNINTIKLVTNNPKKIKDIQDYGITLDEVVHTHAHVKKGNENYLQ---SKVDHGHQLD 196
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_DEHMU (GTP cyclohydrolase-2 (Fragment) OS=Dehalospirillum multivorans GN=ribA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.836e-17 Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 +Q I G G+++YLR EGR IGL +K+ AY LQD G DT+EAN +LG D R Y + +L + ++L+TNNP K LK + + R P+I P N YL+ + MGH+ Sbjct: 25 LQNISLLG-GMIIYLR-QEGRNIGLFNKVNAYALQDQGFDTIEANHQLGFKSDERSYEVVETILEHFKIDKIRLLTNNPKKMSCLK--NIMIIERWPIIIPSNNHNVDYLKTKKEMMGHL 140
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_VIBCH (GTP cyclohydrolase-2 OS=Vibrio cholerae GN=ribA PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.968e-16 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = -3 Query: 393 GVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 722 G+++YLR EGRGIGL +K+ AY LQ G +T EAN LG D R++ AQML+ LGV+ ++L+TNNP K L+ +G+ + V +K N+ YL +AK+ H Sbjct: 86 GIILYLR-QEGRGIGLYNKIDAYRLQSQGMNTYEANNHLGFGDDLRDFTEAAQMLQALGVKKIRLVTNNPKKIRELQEHGIEIVEVVHTSAHIKDGNENYL---KAKVSH 191
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_VIBF1 (GTP cyclohydrolase-2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ribA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = -3 Query: 393 GVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 722 G+++YLR EGRGIGL +KL AY LQ G +T EAN LG D R++ AQML L + +KL+TNNP K ++ YG+ + V +K+ N+ YL +A GH Sbjct: 86 GIILYLR-QEGRGIGLYNKLDAYELQSQGMNTYEANNHLGFGDDLRDFKEAAQMLEALNISKIKLVTNNPKKIKDIQNYGIEIDEVVNTHAHVKQGNEHYLH-SKAAHGH 193
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_PHOPO (GTP cyclohydrolase-2 OS=Photobacterium phosphoreum GN=ribA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.666e-15 Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = -3 Query: 378 QIEAAGRGVLVYLRGHEGR-GIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYGLE 743 +I A G+++YLR EGR G+GL +K+ AY LQ G DT EAN LG D RE+ AQML LG++ ++L+TNNP K L+ G+ + V LK+ N+ YL+ + H + + Sbjct: 78 EIMAELGGIILYLR-QEGRWGLGLYNKIDAYKLQSQGMDTYEANNHLGFDDDLREFSEAAQMLTALGIKDIRLVTNNPKKIKDLQQNGINIVEVVGTKAHLKEGNEGYLKAKASHGRHCFNFD 199 The following BLAST results are available for this feature:
BLAST of CN186207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186207 ID=CN186207; Name=CN186207; organism=Citrus sinensis; type=EST; length=751bpback to top |