CN186207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_PORGI (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis GN=ribBA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.898e-27 Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = -3 Query: 393 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 749 M++IE G+G ++YL EGRGIGL K++AY LQ+ G DT++AN LG D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL + +PL T + N+ YL + +MGH Sbjct: 282 MEKIEKEGKGAIIYLN-QEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPLETAPNRYNEFYLRTKKERMGH 399
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_PORG3 (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=ribBA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.898e-27 Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = -3 Query: 393 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 749 M++IE G+G ++YL EGRGIGL K++AY LQ+ G DT++AN LG D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL + +PL T + N+ YL + +MGH Sbjct: 282 MEKIEKEGKGAIIYLN-QEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPLETAPNRYNEFYLRTKKERMGH 399
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPG (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain GB-1) GN=ribA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.898e-27 Identity = 66/127 (51.97%), Postives = 80/127 (62.99%), Query Frame = -3 Query: 369 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYGLESNG 749 +Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL T N+ YL K+GH+ G E G Sbjct: 75 LQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPLHTGHNPHNRYYLATKAGKLGHMLGNEHQG 200
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_PSEA7 (GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa (strain PA7) GN=ribA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.898e-27 Identity = 65/119 (54.62%), Postives = 79/119 (66.39%), Query Frame = -3 Query: 384 IEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYG 740 I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEAN +LG D R+Y + ML LGV +++LMTNNP K L+ Y + VA RVPL L K N+RYL K+GH+ G Sbjct: 78 IAEEGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALESYAVTVAERVPLQKGLNKHNRRYLATKAGKLGHMLG 195
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_ARCFU (GTP cyclohydrolase-2 OS=Archaeoglobus fulgidus GN=ribA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.898e-27 Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 ++ I+ G+GV +Y+RGHEGRGIGL +KL AY LQ++G+DTV+AN ELG P D R YGI AQ+L DL V++++L+TNNP K LK YG + R P+ + N YL+ + KMGH+ Sbjct: 255 LKMIDREGKGVAIYMRGHEGRGIGLINKLMAYKLQEEGKDTVDANIELGFPPDMRSYGIAAQILMDLKVKSIRLLTNNPLKIEELKKYGFKIV-REPIEVEPCEVNLPYLKAKKDKMGHL 373
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_NEIG1 (GTP cyclohydrolase-2 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=ribA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.479e-27 Identity = 61/120 (50.83%), Postives = 85/120 (70.83%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 M+ ++A GRG++VYLR EGRGIGL +K+RAY+LQ+ G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL EN+RYL+ K+GH+ Sbjct: 76 MRAVQAEGRGIIVYLR-QEGRGIGLINKIRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPLHVGENLENERYLQTKADKLGHL 194
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_PSEE4 (GTP cyclohydrolase-2 OS=Pseudomonas entomophila (strain L48) GN=ribA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.419e-27 Identity = 65/129 (50.39%), Postives = 81/129 (62.79%), Query Frame = -3 Query: 363 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYGLESNGRL 749 +Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL T N+ YL K+GH+ G + G + Sbjct: 75 LQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMSIKVAERVPLHTGHNPHNRLYLATKADKLGHMMGNKHQGEV 202
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_THEPX (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter sp. (strain X514) GN=ribBA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.098e-26 Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 M++I G G+LVYLR EGRGIGL +K++AY+LQD G DTVEAN +LG P D REY I AQ+L+D+GV+ +++MTNNP K L YGL V RV + N++YL+ + KMGH+ Sbjct: 275 MERIGQEG-GILVYLR-QEGRGIGLLNKIKAYHLQDQGLDTVEANIKLGFPPDLREYNIAAQILKDIGVKKIRIMTNNPQKITELSDYGLDVVERVSIEICPNHYNEKYLKTKKEKMGHL 392
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_THEP3 (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ribBA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.740e-26 Identity = 63/120 (52.50%), Postives = 85/120 (70.83%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 M++I G GVLVYLR EGRGIGL +K++AY+LQD G DTVEAN +LG P D REY I AQ+L+D+GV+ +++MTNNP K + L YGL V RV + N++YL+ + +MGH+ Sbjct: 275 MERIGQEG-GVLVYLR-QEGRGIGLLNKIKAYHLQDQGLDTVEANIKLGFPPDLREYSIAAQILKDIGVKKIRIMTNNPQKIMELSDYGLDVVERVSIEICPNHYNEKYLKTKKERMGHL 392
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_HAHCH (GTP cyclohydrolase-2 OS=Hahella chejuensis (strain KCTC 2396) GN=ribA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.973e-26 Identity = 61/120 (50.83%), Postives = 77/120 (64.17%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 ++ I A GRG+L+YLR EGRGIGL +K+RAYNLQD G DTVEANE+LG D R+Y + ML LG+ ++LMTNNP K L G+ V RVPL N+ YL K+GH+ Sbjct: 75 LRSIAAEGRGILLYLR-QEGRGIGLLNKIRAYNLQDQGADTVEANEQLGFAADMRDYSMCKPMLYHLGISRIRLMTNNPRKVDSLTKLGIEVVERVPLEVGRNPHNRNYLATKAGKLGHL 193 The following BLAST results are available for this feature:
BLAST of CN186207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186207 ID=CN186207; Name=CN186207; organism=Citrus sinensis; type=EST; length=751bpback to top |