CN186207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SACD2 (GTP cyclohydrolase-2 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ribA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.041e-25 Identity = 61/122 (50.00%), Postives = 75/122 (61.48%), Query Frame = -3 Query: 384 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYG 749 M +I GRG + YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I M LG+ +KLMTNNP K L YG+ + R+P T N YLE + K+GH++G Sbjct: 75 MHKIAIEGRGAIFYLR-QEGRGIGLLNKIRAYKLQDCGADTVEANERLGFGADMRDYSILKPMFEHLGIAQVKLMTNNPRKIDALTQYGINIVNRIPHETGRNPHNADYLETKKGKLGHMFG 195
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_AERHH (GTP cyclohydrolase-2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ribA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.360e-25 Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = -3 Query: 387 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIY 749 ++ I AGRGVL+Y+R EGRGIGL +K+RAY+LQD G DTVEAN LG D R+Y I A ML+ L V+++KLMTNNP K ++ +G+ VA RVPL N+ YL K+ H++ Sbjct: 76 LENIAKAGRGVLLYVR-QEGRGIGLLNKIRAYHLQDQGADTVEANVALGFAADMRDYTICADMLKQLEVKSLKLMTNNPRKMKAMESFGIPVAERVPLQEGRNPHNEFYLSTKANKLDHMF 195
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SHEAM (GTP cyclohydrolase-2 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ribA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.030e-25 Identity = 62/124 (50.00%), Postives = 80/124 (64.52%), Query Frame = -3 Query: 378 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYGLE 749 MQ+I GRG ++YLR EGRGIGL +K+RAY LQD G +TVEANE+LG D R+Y + A ML LG+ +KLMTNNP K +K G+ V RVPL + N+ YL+ K+GH+ E Sbjct: 75 MQRIAETGRGFILYLR-QEGRGIGLLNKIRAYELQDKGANTVEANEQLGFAADMRKYDMIAPMLAHLGISRVKLMTNNPRKVNAMKDVGMDVVERVPLQVGKNRYNEAYLKTKSDKLGHMMSEE 197
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_TERTT (GTP cyclohydrolase-2 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=ribA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.957e-25 Identity = 60/120 (50.00%), Postives = 75/120 (62.50%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 M +I GRG + YLR EGRGIGL +K+RAY+LQD G DTVEANE LG D R+Y + M +G+ +KLMTNNP K L G G+ +A R+P T N YLE R K+GH+ Sbjct: 75 MHRISIEGRGAIFYLR-QEGRGIGLVNKIRAYHLQDKGADTVEANEALGFGADMRDYSMLKPMFEKMGISRVKLMTNNPRKIDALIGLGIDIAERLPHETGRNPHNSHYLETKRGKLGHL 193
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SHESH (GTP cyclohydrolase-2 OS=Shewanella sediminis (strain HAW-EB3) GN=ribA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.750e-25 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 MQ I AG+G ++YLR EGRGIGL +K+RAY LQD G +TVEANE LG P D R+Y + M+ +G++ +KLMTNNP K +K G+ V R+PL + N+ YL+ ++GH+ Sbjct: 75 MQNIAEAGQGFILYLR-QEGRGIGLLNKIRAYELQDQGANTVEANERLGFPADMRKYDMILPMMEKIGIKQVKLMTNNPRKVKAMKELGIEVVERIPLQVGKNRYNEGYLKTKSTELGHM 193
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SHELP (GTP cyclohydrolase-2 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ribA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.750e-25 Identity = 60/120 (50.00%), Postives = 79/120 (65.83%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 MQ I AG+G ++YLR EGRGIGL +K+RAY LQD G +TVEANE LG D R+Y + ML +GV+ +KLMTNNP K +K G+AV RVPL + N+ YL+ ++GH+ Sbjct: 75 MQNIAEAGQGFILYLR-QEGRGIGLLNKIRAYELQDQGANTVEANERLGFAADMRKYDMIKPMLEKIGVQQVKLMTNNPRKVKAMKELGIAVIERVPLQVGKNRYNEAYLKTKSTELGHM 193
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SHESW (GTP cyclohydrolase-2 OS=Shewanella sp. (strain W3-18-1) GN=ribA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.816e-25 Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 MQ I G G ++YLR EGRGIGL +K+RAY LQD G +TVEANE+LG P D R+Y + ML +GV+ ++LMTNNP K +K +G+ V RVPL + N+ YL+ ++GH+ Sbjct: 75 MQNIAETGCGFILYLR-QEGRGIGLLNKIRAYELQDKGANTVEANEQLGFPADMRKYDMIKPMLEQIGVKHVRLMTNNPRKVKAMKEFGIEVVERVPLQVGKNRYNEAYLKTKSTELGHM 193
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SHEPC (GTP cyclohydrolase-2 OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ribA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.816e-25 Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 MQ I G G ++YLR EGRGIGL +K+RAY LQD G +TVEANE+LG P D R+Y + ML +GV+ ++LMTNNP K +K +G+ V RVPL + N+ YL+ ++GH+ Sbjct: 75 MQNIAETGCGFILYLR-QEGRGIGLLNKIRAYELQDKGANTVEANEQLGFPADMRKYDMIKPMLEQIGVKHVRLMTNNPRKVKAMKEFGIEVVERVPLQVGKNRYNEAYLKTKSTELGHM 193
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SHESR (GTP cyclohydrolase-2 OS=Shewanella sp. (strain MR-7) GN=ribA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.504e-24 Identity = 58/120 (48.33%), Postives = 78/120 (65.00%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 MQ I G G ++YLR EGRGIGL +K+RAY LQD G +TVEANE+LG P D R+Y + ML +GV+ ++LMTNNP K +K G+ V RVPL + N+ YL+ ++GH+ Sbjct: 75 MQNIAETGSGFILYLR-QEGRGIGLLNKIRAYELQDKGANTVEANEQLGFPADMRKYDMIQPMLEQIGVKHVRLMTNNPRKVKAMKEIGIEVVERVPLQVGKNRYNEAYLKTKSTELGHM 193
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBA_SHESM (GTP cyclohydrolase-2 OS=Shewanella sp. (strain MR-4) GN=ribA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.504e-24 Identity = 58/120 (48.33%), Postives = 78/120 (65.00%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 MQ I G G ++YLR EGRGIGL +K+RAY LQD G +TVEANE+LG P D R+Y + ML +GV+ ++LMTNNP K +K G+ V RVPL + N+ YL+ ++GH+ Sbjct: 75 MQNIAETGSGFILYLR-QEGRGIGLLNKIRAYELQDKGANTVEANEQLGFPADMRKYDMIQPMLEQIGVKHVRLMTNNPRKVKAMKEIGIEVVERVPLQVGKNRYNEAYLKTKSTELGHM 193 The following BLAST results are available for this feature:
BLAST of CN186207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186207 ID=CN186207; Name=CN186207; organism=Citrus sinensis; type=EST; length=751bpback to top |