CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_LISMO (Guanylate kinase OS=Listeria monocytogenes GN=gmk PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.220e-36
Identity = 79/179 (44.13%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   + K+  + F +S+S TTR PR  E+DGV Y+F  R V E+AIKDGK LE+A   GN YGT +E VE    AG    L+I+VQGA  VR +  + IFIF+ PP + EL+ R+  RGTE+ + + +R+  AK+EIE   S   +D+ + ND +    + +K ++
Sbjct:    8 IVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMMAS---YDYAVVNDVVANAVQKIKGIV 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_LISMF (Guanylate kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gmk PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.220e-36
Identity = 79/179 (44.13%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   + K+  + F +S+S TTR PR  E+DGV Y+F  R V E+AIKDGK LE+A   GN YGT +E VE    AG    L+I+VQGA  VR +  + IFIF+ PP + EL+ R+  RGTE+ + + +R+  AK+EIE   S   +D+ + ND +    + +K ++
Sbjct:    8 IVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMMAS---YDYAVVNDVVANAVQKIKGIV 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_BACSK (Guanylate kinase OS=Bacillus clausii (strain KSM-K16) GN=gmk PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.220e-36
Identity = 81/179 (45.25%), Postives = 120/179 (67.04%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GP+GVGKGT+   L  +  ++  +SVS TTR PR  EK GV+Y F  R   E+ I+DGK LE+A   GN YGT ++ V+   +AGK  IL+I+VQGA+ VR    + +FIF+ PPS++EL +R+  RGTETED I +R+  AKEEI+      ++D+++ NDK+E   E +K ++
Sbjct:    9 IVLSGPAGVGKGTVCGALRNQNTAI-EYSVSATTRKPREGEKHGVNYFFKTREQFEQMIEDGKLLEWAEYVGNYYGTPIDYVQETINAGKDIILEIEVQGAQKVRTVFPEGVFIFLAPPSLKELRDRIVGRGTETEDIINERMTVAKEEID---LMTMYDYVVENDKVEWAVERIKAIV 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_DESVH (Guanylate kinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gmk PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.899e-36
Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLK 573
            +V+  PSG GK TL   L+ EFP  F FSVS+TTR PR  E DG  YHF       +    G F E+A VHGN YGT ++A   + D G+  + DIDVQGAR +RAS     ++FI PPS +ELE RLRARGT+ E+ I +RL NA +E+ + +    FD  + ND LE  Y+ L+
Sbjct:   10 LVLCAPSGTGKTTLTRRLLTEFPR-FAFSVSYTTRKPRNGEVDGKDYHFVTVEAFLRLRDAGFFAEWAEVHGNFYGTPLKATLDLLDEGRDVLFDIDVQGARQLRASLQRGRYVFIMPPSRDELEHRLRARGTDDEETIARRLANAAKELREARR---FDAWIVNDDLERAYDELR 181          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNJB (Guanylate kinase OS=Synechococcus sp. GN=gmk PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.459e-36
Identity = 80/179 (44.69%), Postives = 116/179 (64.80%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            VV+TGPSGVGKGTL++ L +  P ++  SVS TTR PR  E++GV+Y+F  R      I+  + LE+A   GN YGT  E V    + G+  +L+I++ GAR VR    DAI IF+CPPS+EELE R+R RG ++E  I +RL  A++E++   +   FD+++ ND LE+  + L+ LL
Sbjct:   35 VVLTGPSGVGKGTLVNQLRQRHPELY-LSVSVTTRPPRPSEQEGVNYYFRSREEFLNLIEANELLEWAQYAGNFYGTPREIVFQKLNQGQDVLLEIELAGARQVRQQYPDAIRIFLCPPSLEELERRIRERGQDSEASIERRLEQARKELD---AQDEFDYVIVNDNLEQALQELEALL 209          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CARHZ (Guanylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gmk PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.459e-36
Identity = 80/179 (44.69%), Postives = 118/179 (65.92%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            VV++GPSG GKGT+   + K  P++F +S+S TTR  R  E DGVHY+F +R   EK I + +FLE+A V+GN YGT  + V      G+  IL+ID++GAR V+ +  + +F+FI PPS+  LEERLR RGT+ E+ I+KR++ A EEI    +   +D+++ ND LE    +L+ +L
Sbjct:    7 VVVSGPSGAGKGTICQEIRKRNPNLF-YSISATTREKRVGEIDGVHYYFIDRQQFEKMIANDEFLEWADVYGNYYGTPKKPVFEALARGQDVILEIDIKGARQVKKTYPEGVFVFILPPSISILEERLRKRGTDKEEIIVKRMQMAWEEI---ANCDWYDYLILNDDLETAVNDLEAVL 181          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNPX (Guanylate kinase OS=Synechococcus sp. (strain WH8102) GN=gmk PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.436e-36
Identity = 84/180 (46.67%), Postives = 115/180 (63.89%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGL 588
            VITGPSGVGKGTL+  L+   PS++  SVS TTRAPR  E++G  Y F  R   +  +++G  LE+A   GN YGT    VE    AG+  +L+I+++GAR VR S   A  IF+ PPS EELE R+R RGT++ED I +RL  A+EE+    + G FD ++ ND L++    L+ L+GL
Sbjct:    6 VITGPSGVGKGTLVQRLLARNPSIW-VSVSATTRAPREGEREGESYFFHSRERFDALVQEGGLLEWAEFAGNCYGTPRAPVEQQLQAGRPVLLEIELEGARQVRRSFSKARQIFLAPPSFEELERRIRGRGTDSEDAIQQRLLRAREEL---SAQGEFDAVVVNDDLDQALLKLEGLMGL 181          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CLOPS (Guanylate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=gmk PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.102e-35
Identity = 76/179 (42.46%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +VI+GPSG GKGT+   L+++   +F  SVS TTR PR  E DGV+YHF  +   ++ I +  FLE A V+GN YGT   +VE + D GK  IL+ID+QGA  V+    D +FIFI PPSMEEL++R+  RG+ET + ++ R ++A +EI        +++ + ND +E+  + ++ +L
Sbjct:   14 IVISGPSGAGKGTICKALLEKHDDIF-ISVSATTRNPRVGEVDGVNYHFLTKEEFKQRIAEDDFLEHAEVYGNYYGTPKSSVEKMLDEGKNVILEIDIQGALKVKEKATDGVFIFILPPSMEELKQRIIKRGSETPESLMTRFKSAYKEINYVSK---YNYAVVNDNVEDAVKKIEAIL 188          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CLOP1 (Guanylate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=gmk PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.102e-35
Identity = 76/179 (42.46%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +VI+GPSG GKGT+   L+++   +F  SVS TTR PR  E DGV+YHF  +   ++ I +  FLE A V+GN YGT   +VE + D GK  IL+ID+QGA  V+    D +FIFI PPSMEEL++R+  RG+ET + ++ R ++A +EI        +++ + ND +E+  + ++ +L
Sbjct:   14 IVISGPSGAGKGTICKALLEKHDDIF-ISVSATTRNPRVGEVDGVNYHFLTKEEFKQRIAEDDFLEHAEVYGNYYGTPKSSVEKMLDEGKNVILEIDIQGALKVKEKATDGVFIFILPPSMEELKQRIIKRGSETPESLMTRFKSAYKEINYVSK---YNYAVVNDNVEDAVKKIEAIL 188          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CLOPE (Guanylate kinase OS=Clostridium perfringens GN=gmk PE=3 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.439e-35
Identity = 75/179 (41.90%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +VI+GPSG GKGT+   L+++   +F  S+S TTR PR  E DGV+YHF  +   ++ I +  FLE A V+GN YGT   +VE + D GK  IL+ID+QGA  V+    D +FIFI PPSMEEL++R+  RG+ET + ++ R ++A +EI        +++ + ND +E+  + ++ +L
Sbjct:   14 IVISGPSGAGKGTICKALLEKHDDIF-ISISATTRNPRVGEVDGVNYHFLTKEEFKQRIAEDDFLEHAEVYGNYYGTPKSSVEKMLDEGKNVILEIDIQGALKVKEKATDGVFIFILPPSMEELKQRIIKRGSETPESLMTRFKSAYKEINYVSK---YNYAVVNDNVEDAVKKIEAIL 188          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_LISMO2.220e-3644.13Guanylate kinase OS=Listeria monocytogenes GN=gmk ... [more]
KGUA_LISMF2.220e-3644.13Guanylate kinase OS=Listeria monocytogenes serotyp... [more]
KGUA_BACSK2.220e-3645.25Guanylate kinase OS=Bacillus clausii (strain KSM-K... [more]
KGUA_DESVH2.899e-3647.16Guanylate kinase OS=Desulfovibrio vulgaris (strain... [more]
KGUA_SYNJB6.459e-3644.69Guanylate kinase OS=Synechococcus sp. GN=gmk PE=3 ... [more]
KGUA_CARHZ6.459e-3644.69Guanylate kinase OS=Carboxydothermus hydrogenoform... [more]
KGUA_SYNPX8.436e-3646.67Guanylate kinase OS=Synechococcus sp. (strain WH81... [more]
KGUA_CLOPS1.102e-3542.46Guanylate kinase OS=Clostridium perfringens (strai... [more]
KGUA_CLOP11.102e-3542.46Guanylate kinase OS=Clostridium perfringens (strai... [more]
KGUA_CLOPE1.439e-3541.90Guanylate kinase OS=Clostridium perfringens GN=gmk... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
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