CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_EHRCJ (Guanylate kinase OS=Ehrlichia canis (strain Jake) GN=gmk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.425e-16
Identity = 61/177 (34.46%), Postives = 86/177 (48.59%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGA-RSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLK 573
            +VI+ PSG GK T+  +L+ E  +    SVS TTR PR  E +G  Y F             + LE+A V GN YG   + V      G   +  ID QGA + +       + +FI PPSMEEL  RL  R  ++ D + KRL  A  EI+       +D+++ N  +EE    +K
Sbjct:   12 LVISSPSGGGKTTISHLLIDELQNDLVRSVSVTTREPRDGEVNGKDYFFVTEHEFINLCNTDQMLEYAKVFGNYYGIPRKFVMDNITTGVSVLFSIDWQGAFKLIDIMREHVVSVFILPPSMEELRRRLYNRSGKS-DIVKKRLGEAAFEIDHCYR---YDYVIVNHDVEESVHQIK 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: MPP3_MOUSE (MAGUK p55 subfamily member 3 OS=Mus musculus GN=Mpp3 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16
Identity = 45/127 (35.43%), Postives = 65/127 (51.18%), Query Frame = 1
Query:   37 EKP--VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSME 411
            E+P  VV+ G  G     L   ++ E P  F  +V HTTR  ++ E DGV YHF  +   E  +   +FLE      NLYGTS+EA++AV    K C++D++ +  R +R        IF+ P   E
Sbjct:  383 ERPRLVVLIGSLGAHLHELKQRVVAEDPQQFAVAVPHTTRPRKSHEIDGVEYHFVSKQAFEADVHHNRFLEHGEYKENLYGTSLEAIQAVMAKNKVCLVDVEPEALRHLRTPEFKPYVIFVKPAIQE 509          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_WIGBR (Guanylate kinase OS=Wigglesworthia glossinidia brevipalpis GN=gmk PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16
Identity = 55/178 (30.90%), Postives = 86/178 (48.31%), Query Frame = 1
Query:   52 ITGPSGVGKGTLISMLMKEFPSM-FGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            I+ PSG GK +LI   +     M F  S+SHTTR  R+ E +G  Y F  +   +K I + KF+E+     N YGTS + V+    +      D++ +G + ++      I IFI PPS  +L +RL  R    E ++ KR    K++I    +   +D IL N         +K ++
Sbjct:    9 ISAPSGTGKSSLIKTFLNTNLGMNFRLSISHTTRNIRSEEIEGKDYFFISKEKFKKMIFEKKFIEYTYSFNNYYGTSFKEVKNKIKSNFSLFFDVNYKGVKKIKEFIPKLISIFILPPSKLDLLKRLYNRYNSNEFELNKRFYKYKKDI---LNYNKYDFILINRDFNNTLNKIKTII 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: EM55_TAKRU (55 kDa erythrocyte membrane protein OS=Takifugu rubripes GN=mpp1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.654e-15
Identity = 49/181 (27.07%), Postives = 86/181 (47.51%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            K +V+ G  GVG+  + ++L+ ++P  F + V HTTR  R  + +G  Y F     M K I   + LE+ S  G ++GT  E ++ + +  K  +LD++ Q  + +R +    + +FI P       E L+    E+E  IL   R              FD +L N+ + E  + +++ L
Sbjct:  284 KTLVLIGAPGVGRRHIKNVLLTKYPEKFSYPVPHTTRPQRKGDANGEEYFFISNEAMTKCISANELLEYGSFQGYMFGTITETIQKIHEQDKIALLDVEPQTMKVLRTADFGPLMVFIAPTDTAAQTENLQMIQKESE-TILNTYRQ------------YFDVVLVNNDVNESVKIVEEAL 451          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: CAKI_DROME (Calcium/calmodulin-dependent protein kinase OS=Drosophila melanogaster GN=Caki PE=1 SV=4)

HSP 1 Score: 80.4925 bits (197), Expect = 1.072e-14
Identity = 45/178 (25.28%), Postives = 85/178 (47.75%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLK 573
            K +V+ G  GVG+  + + L+ ++P  + + + HTTR  +  E++G  Y+F     M   I   ++LE+ +    +YGT ++ +  +   GK  ILD++ Q  + +R +      +FI  PS++ + +          D  L+RL    E + Q      FD  + N+ + E    L+
Sbjct:  712 KTLVLLGAHGVGRRHIKNTLISKYPDKYAYPIPHTTRPAKPEEENGRSYYFVSHDEMMADIGANEYLEYGTHEDAMYGTKLDTIRRIHTEGKMAILDVEPQALKILRTAEFTPYVVFIAAPSLQNIAD---------YDGSLERLAKESEMLRQ-LYGHFFDLTIVNNDISETIATLE 879          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_EHRCJ7.425e-1634.46Guanylate kinase OS=Ehrlichia canis (strain Jake) ... [more]
MPP3_MOUSE9.697e-1635.43MAGUK p55 subfamily member 3 OS=Mus musculus GN=Mp... [more]
KGUA_WIGBR9.697e-1630.90Guanylate kinase OS=Wigglesworthia glossinidia bre... [more]
EM55_TAKRU1.654e-1527.0755 kDa erythrocyte membrane protein OS=Takifugu ru... [more]
CAKI_DROME1.072e-1425.28Calcium/calmodulin-dependent protein kinase OS=Dro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
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