CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_DESHY (Guanylate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=gmk PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34
Identity = 76/179 (42.46%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSG GKGTL   L+++ P +  +SVS TTR PR  E DG+HY+F  R   +  I+  + LE+A   GN YGT   AVE    AG   IL+I++QGA  V+      +FIF+ PPSM+EL +R+  RGTE+E+ I KRL+ A  E+E       +D+++ ND++    + LK +L
Sbjct:    9 IVLSGPSGAGKGTLCQELLRQLPQV-KYSVSATTRQPRPGEMDGLHYYFRSREEFQTMIEQDQLLEWAEFCGNYYGTPQFAVEQAIQAGNDVILEIEIQGALQVKQRFPQGVFIFVVPPSMDELSQRIHKRGTESEEVIQKRLQTAARELEYVSE---YDYVVVNDEIPLAVDKLKSIL 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CLOTE (Guanylate kinase OS=Clostridium tetani GN=gmk PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34
Identity = 77/182 (42.31%), Postives = 113/182 (62.09%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGLD 591
            +VI+GPSG GKGT+   L++   + F FSVS TTR PR  E  G  Y+F  +   E  IK+  FLE+A V+GN YGT    V  + D GK  IL+ID+QGA  V+ +  + IFIFI PPSMEEL+ R+  RGTETE+ ++ R ++A +EI        +++ + NDK+ +  E ++ ++  +
Sbjct:    7 IVISGPSGTGKGTVCKELLRN--NNFWFSVSSTTRDPREGEIQGKSYYFMSKEEFEDKIKENDFLEYAKVYGNYYGTPKSKVIEMLDKGKDVILEIDIQGALQVKENYKEGIFIFILPPSMEELKNRIIKRGTETEESLMTRFKSAYKEINYVSK---YNYAVVNDKVHDAVEKIQSIISAE 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNS9 (Guanylate kinase OS=Synechococcus sp. (strain CC9902) GN=gmk PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.714e-34
Identity = 78/175 (44.57%), Postives = 110/175 (62.86%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLK 573
            V+TGPSGVGKGTL+  L+ + P ++  SVS TTR PRA E++GV Y F  R   +  +  G  LE+A    N YGT  + VE    AG+  +L+I+++GAR VR S  DA  +F+ PPS  ELE R+R RGT+TED I +RL  A+EE+    +   FD ++ ND L++  + L+
Sbjct:    9 VLTGPSGVGKGTLVKRLLDQHPEIW-LSVSATTRQPRAGEEEGVSYFFHPRDTFDALVAAGGLLEWAEFASNCYGTPRDPVEEHLAAGRPVLLEIELEGARQVRTSFPDAFQVFLAPPSFAELERRIRGRGTDTEDAIQRRLARAREEL---NAQNEFDAVVVNDDLDQALKQLE 179          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNY3 (Guanylate kinase OS=Synechocystis sp. (strain PCC 6803) GN=gmk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.544e-34
Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = 1
Query:   10 SIKGVIGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLG 585
            S+KG +      +V+TGPSGVGKGTL+ +L++  P  F  S+S TTR+PRA E DG  Y+F  +   +  I + K LE+A   GN YGT  + VE     GK  +L+I+V GAR ++ +   A  IFI PPS+E LEERLR RG+++E  I KRL  A++E++   ++  FD+ + ND L++    L KL+G
Sbjct:    7 SVKGQL------IVLTGPSGVGKGTLVQLLLERQPHWF-LSISATTRSPRAGEVDGQSYYFLTKEEFQTWIGEEKLLEWAEYAGNYYGTPRQPVEEQIAQGKTVLLEIEVLGARQIKQTFPSARRIFILPPSVEVLEERLRGRGSDSETAIAKRLAQAQQELQ---AAAEFDYQVVNDDLDQALHRLVKLIG 188          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_GEOKA (Guanylate kinase OS=Geobacillus kaustophilus GN=gmk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.544e-34
Identity = 78/179 (43.58%), Postives = 113/179 (63.13%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   L  +      +SVS TTR PR  E +GV Y F  R   E+ I++ K LE+A   GN YGT ++ VE     GK   L+I+VQGA  VR +  +A+FIF+ PPS+ ELE+R+  RGTE+++ I  RLR AKEE+E       +D+++ ND++E   E +K ++
Sbjct:    9 IVMSGPSGVGKGTVRKALFSQPDINLHYSVSVTTRKPREGEVEGVDYFFRTREQFEQMIRENKLLEWAEYVGNYYGTPIDYVEKTLAEGKDVFLEIEVQGAMKVRRAFPEALFIFLAPPSLTELEKRIMGRGTESKELIENRLRAAKEELEMMDE---YDYVVENDEVELACERIKAIV 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_BACCR (Guanylate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gmk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.544e-34
Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++ PSGVGKGT+   L     + F +S+S TTR PR  E DGV Y F ER   E+ I++ K LE+A   GN YGT ++ VE     GK   L+I+VQGA  V+ +  + +FIF+ PPS+ EL+ R+  RGTETED I  RL  AKEEIE       +D+++ ND++E   + +K ++
Sbjct:    9 IVLSRPSGVGKGTVRKELFSHEDTRFQYSISVTTRKPREGEVDGVDYFFKEREEFEEMIRNEKLLEWAEFVGNYYGTPIDYVEKTLQEGKDVFLEIEVQGAIQVKKAFPEGVFIFLAPPSLSELKSRIVGRGTETEDVIENRLTVAKEEIEM---MDAYDYVVENDQVELACDRIKAIV 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAAR (Guanylate kinase OS=Staphylococcus aureus (strain MRSA252) GN=gmk PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.629e-34
Identity = 71/169 (42.01%), Postives = 110/169 (65.09%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLE 552
            +V++GPSGVGKGT+   + ++  + + +S+S TTR  R  E DGV Y F  R   E  IKD +F+E+A   GN YGT V+ V+   D G    L+I+V+GA+ VR    DA+FIF+ PPS++ L ERL  RGTE++++I  R+  A++E+E      ++D+++ ND++E
Sbjct:    9 IVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESDEKIQSRINEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAAB (Guanylate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gmk PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.629e-34
Identity = 71/169 (42.01%), Postives = 110/169 (65.09%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLE 552
            +V++GPSGVGKGT+   + ++  + + +S+S TTR  R  E DGV Y F  R   E  IKD +F+E+A   GN YGT V+ V+   D G    L+I+V+GA+ VR    DA+FIF+ PPS++ L ERL  RGTE++++I  R+  A++E+E      ++D+++ ND++E
Sbjct:    9 IVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESDEKIQSRINEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CAMJR (Guanylate kinase OS=Campylobacter jejuni (strain RM1221) GN=gmk PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.046e-34
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIF-IFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            ++I+GPSG GK TL+  L  EF     FS+S TTR PR  EK+G+HYHF      +K I    FLE+A VH N YGTS++  +   D GK  + DIDVQG +  R    D I  +FI   + +EL++RL  R T+T  Q+ KRL+NA +E+   K    +D+++ ND+L++ YE L+ +L
Sbjct:    6 LLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGIHYHFISHEEFQKGIDSDHFLEWARVHENFYGTSLKHTQNALDNGKIVVFDIDVQGFKIARKKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEM---KELSEYDYLIINDELKQSYEALRAIL 182          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CAMJE (Guanylate kinase OS=Campylobacter jejuni GN=gmk PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.046e-34
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIF-IFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            ++I+GPSG GK TL+  L  EF     FS+S TTR PR  EK+G+HYHF      +K I    FLE+A VH N YGTS++  +   D GK  + DIDVQG +  R    D I  +FI   + +EL++RL  R T+T  Q+ KRL+NA +E+   K    +D+++ ND+L++ YE L+ +L
Sbjct:    8 LLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGIHYHFISHEEFQKGIDSDHFLEWARVHENFYGTSLKHTQNALDNGKIVVFDIDVQGFKIARKKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEM---KELSEYDYLIINDELKQSYEALRAIL 184          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_DESHY2.078e-3442.46Guanylate kinase OS=Desulfitobacterium hafniense (... [more]
KGUA_CLOTE2.078e-3442.31Guanylate kinase OS=Clostridium tetani GN=gmk PE=3... [more]
KGUA_SYNS92.714e-3444.57Guanylate kinase OS=Synechococcus sp. (strain CC99... [more]
KGUA_SYNY33.544e-3443.23Guanylate kinase OS=Synechocystis sp. (strain PCC ... [more]
KGUA_GEOKA3.544e-3443.58Guanylate kinase OS=Geobacillus kaustophilus GN=gm... [more]
KGUA_BACCR3.544e-3443.58Guanylate kinase OS=Bacillus cereus (strain ATCC 1... [more]
KGUA_STAAR4.629e-3442.01Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_STAAB4.629e-3442.01Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_CAMJR6.046e-3442.78Guanylate kinase OS=Campylobacter jejuni (strain R... [more]
KGUA_CAMJE6.046e-3442.78Guanylate kinase OS=Campylobacter jejuni GN=gmk PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
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