CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAAN (Guanylate kinase OS=Staphylococcus aureus (strain N315) GN=gmk PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.896e-34
Identity = 71/169 (42.01%), Postives = 109/169 (64.50%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLE 552
            +V++GPSGVGKGT+   + ++  + + +S+S TTR  R  E DGV Y F  R   E  IKD +F+E+A   GN YGT V+ V+   D G    L+I+V+GA+ VR    DA+FIF+ PPS++ L ERL  RGTE+ ++I  R+  A++E+E      ++D+++ ND++E
Sbjct:    9 IVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAAM (Guanylate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gmk PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.896e-34
Identity = 71/169 (42.01%), Postives = 109/169 (64.50%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLE 552
            +V++GPSGVGKGT+   + ++  + + +S+S TTR  R  E DGV Y F  R   E  IKD +F+E+A   GN YGT V+ V+   D G    L+I+V+GA+ VR    DA+FIF+ PPS++ L ERL  RGTE+ ++I  R+  A++E+E      ++D+++ ND++E
Sbjct:    9 IVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_MYXXD (Guanylate kinase OS=Myxococcus xanthus (strain DK 1622) GN=gmk PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.347e-33
Identity = 72/179 (40.22%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++ PSG GK TL   L+KE P    FS+S TTR PR  E++GV Y+F + +  +  I+ G+F+E+A V+G+ YG+    V+         I DIDVQG ++++    DA+ IF+ PPSMEELE RLR R T++++ I +R+  A+ EIE+G +S  +D+++ ND  E  + +L+ ++
Sbjct:   13 LVLSAPSGAGKTTLAHRLLKETPDAV-FSISVTTRRPRGKEREGVDYNFVDVATFQSKIERGEFVEWAEVYGHFYGSPQSVVDEARARKSAAIFDIDVQGGQAIKRKHPDAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSEIERGIAS--YDYVVVNDDFERAFSDLRSVV 188          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CHRVO (Guanylate kinase OS=Chromobacterium violaceum GN=gmk PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.347e-33
Identity = 80/176 (45.45%), Postives = 113/176 (64.20%), Query Frame = 1
Query:   25 IGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLE 552
            IGN+    ++  PSG GK +L++ L++  PS+   S+S++TR  R  E DG HYHF +R+  E+    G FLE+A V+GN YGTS   +    +AG+  +L+ID QGA  VR    DAI IFI PPS+EELE RLR R T+TE+ IL+RL +A+ EI++      +D+I+ ND  E
Sbjct:    5 IGNI---YIVVAPSGAGKTSLVAALLQAEPSV-ELSISYSTRQARKGEIDGQHYHFIDRAAFEEMKDRGDFLEWAEVYGNCYGTSAPWIRGRLEAGRDILLEIDWQGAEQVRKVFPDAIGIFIAPPSIEELERRLRGRDTDTEEVILRRLASARAEIDK---IAEYDYIVVNDDFE 173          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_AZOSE (Guanylate kinase OS=Azoarcus sp. (strain EbN1) GN=gmk PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.759e-33
Identity = 77/175 (44.00%), Postives = 113/175 (64.57%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENL 570
            ++IT PSG GK TL+S L++  P +   SVS+TTR PR  E+DG  YHF + +        G+FLE+A VHGN Y TS   ++     G+  +L+ID QGA+ VR S  DA+ +FI PPS+EELE RLR RGT+++D I++RL  A+ E+   +  G FD+++ N+ L+   ++L
Sbjct:    6 IIITAPSGAGKTTLVSGLLERDPQV-NLSVSYTTREPRPGERDGREYHFVDVATFRALRDRGEFLEWAEVHGNYYATSKVWLKQQIATGRDILLEIDWQGAQQVRKSFPDAVGVFILPPSLEELEARLRGRGTDSDDVIMRRLLGARGEM---RHVGEFDYVILNNDLQCALDDL 176          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SPHAL (Guanylate kinase OS=Sphingopyxis alaskensis GN=gmk PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33
Identity = 86/212 (40.57%), Postives = 119/212 (56.13%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSV--RASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGLDGSIAATHQTSPKGIDLPADHSVSKADNKV 678
            V++ PSG GK T+  M+++E   +   SVS TTR PR  E DGVHYHF +    +K   DG FLE+A V G+ YGT    VE +  AGK  + DID QGA+ +   A P D + +F+ PP+MEELE RLRARGT++++ I  R+  A  EI        +D++L ND + ECY  +  +L  +  +    Q    G       SV  AD K+
Sbjct:   15 VLSSPSGAGKTTISRMMLEEDKDI-ALSVSATTRPPRPGEIDGVHYHFVDTDTFKKMAADGAFLEWAHVFGHRYGTPRAPVEELLAAGKDVLFDIDWQGAQQLYQEAGP-DVVRVFVLPPTMEELERRLRARGTDSDEVIAARMARAANEISHWDG---YDYVLINDHVGECYGEVMAILRAE-RLKRRRQIGLIGFARDLIRSVPDADTKL 220          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_METFK (Guanylate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gmk PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33
Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +IT PSG GK +L+  L+ +       SVSHTTR PR  E+DGVHYHF E +   + +  G FLE A VHG  YGTS   V +    G   IL+ID QGA+ VR+   DAI IFI PPSME LE+RL  R  ++ + I +RL  A+EE+        FD++  ND+ E   E+L+ ++
Sbjct:    7 IITAPSGAGKTSLVRALL-DGDEHIKLSVSHTTRKPRPGEEDGVHYHFVEEARFVELLNHGDFLESAQVHGAYYGTSQSTVNSALAEGYDLILEIDWQGAQQVRSLYADAISIFILPPSMEALEQRLNNRAQDSAEVIARRLAAAREEMRHVTE---FDYVTINDRFEHALEDLRAII 180          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_BACSU (Guanylate kinase OS=Bacillus subtilis GN=gmk PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33
Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   +  +  + F +S+S TTR+PR  E +GV Y F  R   E+ I D K LE+A   GN YGT V+ VE     GK   L+I+VQGA  VR +  + +FIF+ PPS+ EL+ R+  RGTET+  I  R++ AK EIE       +D+++ ND +E   + +K ++
Sbjct:    8 IVLSGPSGVGKGTVRQAIFSQEDTKFEYSISVTTRSPREGEVNGVDYFFKTRDEFEQMIADNKLLEWAEYVGNYYGTPVDYVEQTLQDGKDVFLEIEVQGALQVRNAFPEGLFIFLAPPSLSELKNRIVTRGTETDALIENRMKAAKAEIEM---MDAYDYVVENDNVETACDKIKAIV 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAS1 (Guanylate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gmk PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.919e-33
Identity = 70/179 (39.11%), Postives = 114/179 (63.69%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   +  +  + + +S+S TTR  R  E DGV Y F  +S  E+ IK  +F+E+A   GN YGT V+ V+   D G    L+I+V+GA+ VR    DA+FIF+ PPS++ L ERL  RGTE+ ++I  R+  A++E+E      ++D+++ ND++E   + ++ ++
Sbjct:    9 IVLSGPSGVGKGTVRKKIFDDPSTSYKYSISMTTRDKRQGEVDGVDYFFKAKSEFEELIKQDQFIEYAEYVGNYYGTPVQYVKDTMDRGYDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESSEKIQSRVHEARKEVEM---MNLYDYVVVNDEVELAKQRIQSIV 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAES (Guanylate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gmk PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.919e-33
Identity = 69/179 (38.55%), Postives = 116/179 (64.80%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   + ++  + + +S+S TTR  R  E DGV Y F  +   E  IKD +F+E+A   GN YGT V+ V+   + G    L+I+V+GA+ VR    DA+FIF+ PPS+++L+ERL  RGTE++++I  R+  A++E+E      ++D+++ ND++E     ++ ++
Sbjct:    9 IVLSGPSGVGKGTVRKKIFEDPTTSYKYSISMTTRHMREGEIDGVDYFFKTKEEFEALIKDDQFIEYAQYVGNYYGTPVQYVKDTMEEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDDLKERLVGRGTESDEKIQSRVNEARKEVEM---MNLYDYVVVNDEVELAKNRIQSIV 184          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_STAAN7.896e-3442.01Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_STAAM7.896e-3442.01Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_MYXXD1.347e-3340.22Guanylate kinase OS=Myxococcus xanthus (strain DK ... [more]
KGUA_CHRVO1.347e-3345.45Guanylate kinase OS=Chromobacterium violaceum GN=g... [more]
KGUA_AZOSE1.759e-3344.00Guanylate kinase OS=Azoarcus sp. (strain EbN1) GN=... [more]
KGUA_SPHAL3.000e-3340.57Guanylate kinase OS=Sphingopyxis alaskensis GN=gmk... [more]
KGUA_METFK3.000e-3344.38Guanylate kinase OS=Methylobacillus flagellatus (s... [more]
KGUA_BACSU3.000e-3341.90Guanylate kinase OS=Bacillus subtilis GN=gmk PE=3 ... [more]
KGUA_STAS13.919e-3339.11Guanylate kinase OS=Staphylococcus saprophyticus s... [more]
KGUA_STAES3.919e-3338.55Guanylate kinase OS=Staphylococcus epidermidis (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
back to top