CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAEQ (Guanylate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gmk PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.118e-33
Identity = 69/179 (38.55%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   + ++  + + +S+S TTR  R  E DGV Y F  +   E  IKD +F+E+A   GN YGT V+ V+   + G    L+I+V+GA+ VR    DA+FIF+ PPS+++L ERL  RGTE++++I  R+  A++E+E      ++D+++ ND++E     ++ ++
Sbjct:    9 IVLSGPSGVGKGTVRKKIFEDPTTSYKYSISMTTRHMREGEIDGVDYFFKTKEEFEALIKDDQFIEYAQYVGNYYGTPVQYVKDTMEEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDDLRERLVGRGTESDEKIQSRVNEARKEVEM---MNLYDYVVVNDEVELAKNRIQSIV 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_PELCD (Guanylate kinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gmk PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.730e-33
Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGLDGSIAA 606
            VI+ PSG GK +L   ++  FP M   S+S TTR  R  E DGV YHF    V +  + +G F E+A VHGN YGT++  ++   + G+  +LDID QGA  ++ +  D +FIFI PPS EELE RLR R T+T + I +RL NA+ EI   +    +D+++ N+ L    E  K ++  +G  A+
Sbjct:    9 VISAPSGAGKTSLCRQIVDIFPDM-RHSISFTTRPRRNGETDGVDYHFVTPEVFDTMVAEGAFAEWARVHGNCYGTALATLQEAREQGQDLLLDIDCQGAAQLKRNCPDDVFIFILPPSFEELERRLRGRNTDTAEVIARRLDNARREI---RELVWYDYLIVNEDLPRAVEEFKSIILAEGCRAS 190          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: VA57_VACCW (Guanylate kinase homolog OS=Vaccinia virus (strain Western Reserve) GN=A57R PE=3 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32
Identity = 71/186 (38.17%), Postives = 114/186 (61.29%), Query Frame = 1
Query:   25 IGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +  + K ++++GPSG+GK T I+  + E+   FGF VSHTTR PR ME++GV YH+  R  + K I  G FLE     GN+YGTS  AV   A   + C++D+++ G RS++ + L    ++I P S++ +E +LR R TE  D+I +R+  AK ++++   +G+FD I+  D +   Y  L ++L
Sbjct:    1 MSGIVKSIILSGPSGLGK-TAIAKRLWEY---FGFVVSHTTRFPRPMEREGVDYHYVNREAIWKGIAAGNFLEHTEFLGNIYGTSKTAVNTAAINNRICVMDLNIDGVRSLKNTYLMPYSVYIRPTSLKMVETKLRCRNTEANDEIHRRVILAKTDMDEANEAGLFDTIIIEDDVNLAYSKLIQIL 182          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_VIBVY (Guanylate kinase OS=Vibrio vulnificus (strain YJ016) GN=gmk PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32
Identity = 78/179 (43.58%), Postives = 104/179 (58.10%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSM-FGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +++ PSG GK +LIS ++++ P+     SVSHTTR  R  E+DGVHYHF E+   E  I  G+FLE+A V GN YGTS   +E   D G    LDID QGAR +R     A  IFI PPS  ELE RL  RG ++E  I KR+  AK EI        +D+++ ND  +    + K ++
Sbjct:    8 IVSAPSGAGKSSLISAMLEKNPTYAMKVSVSHTTRGMRPGEQDGVHYHFVEKEHFEDLITKGEFLEYAEVFGNYYGTSRVWIENTLDKGIDVFLDIDWQGARQIREQMPHAKSIFILPPSNGELERRLNTRGQDSEAVIAKRMAEAKSEISHYNE---YDYVIINDDFDTALMDFKAII 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_VIBVU (Guanylate kinase OS=Vibrio vulnificus GN=gmk PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32
Identity = 78/179 (43.58%), Postives = 104/179 (58.10%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSM-FGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +++ PSG GK +LIS ++++ P+     SVSHTTR  R  E+DGVHYHF E+   E  I  G+FLE+A V GN YGTS   +E   D G    LDID QGAR +R     A  IFI PPS  ELE RL  RG ++E  I KR+  AK EI        +D+++ ND  +    + K ++
Sbjct:    8 IVSAPSGAGKSSLISAMLEKNPTYAMKVSVSHTTRGMRPGEQDGVHYHFVEKEHFEDLITKGEFLEYAEVFGNYYGTSRVWIENTLDKGIDVFLDIDWQGARQIREQMPHAKSIFILPPSNGELERRLNTRGQDSEAVIAKRMAEAKSEISHYNE---YDYVIINDDFDTALMDFKAII 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_PROMT (Guanylate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=gmk PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.489e-32
Identity = 74/188 (39.36%), Postives = 119/188 (63.30%), Query Frame = 1
Query:   25 IGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGL 588
            +GN+    V+TGPSGVGKGT++  +++    ++  S+S TTR PR+ E DG HY F E+   ++ I    FLE+AS   N YGT  + V+   + G   +L+I+++GAR +R S  +A  IF+ PP++ ELE+R+R RGTETE+ I  RL  A++E+   K    FD ++ N+ +E+ ++ ++  +GL
Sbjct:    4 LGNL---TVLTGPSGVGKGTIVRKILESHSDVW-LSISATTRQPRSGEIDGEHYFFLEKKQFQEIIDKDGFLEWASFSNNFYGTPKKIVKEKIEKGTNVLLEIELEGARQIRKSFPEAFQIFLAPPNLYELEKRIRGRGTETEESIRDRLSIAEKELIAQKE---FDAVVINEDIEKAFKEIEGFMGL 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNP6 (Guanylate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gmk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.540e-32
Identity = 76/174 (43.68%), Postives = 108/174 (62.07%), Query Frame = 1
Query:   31 NVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLE 552
            ++ + VV+TGPSGVGKGTL+  ++ + P  F  S+S TTR+PR  E DG HY+F  R   +  I + +FLE+A   GNLYGT    V    + G+  IL+I+++GAR VR +   A  + + PPS+EELE+R+R R TE E  I +RL  A+ EI   K    FD  + ND+L+
Sbjct:    2 SIGRVVVLTGPSGVGKGTLLKAILSQHPEAF-LSISATTRSPRPGEVDGQHYYFLSREEFQTKIAEQEFLEWAEFAGNLYGTPRSPVIEQVNLGRTVILEIELEGARQVRKTLPSARQVVLLPPSVEELEQRIRERATEDEAAIARRLLQAQTEIGAAKE---FDRCVINDQLD 171          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRA5 (Guanylate kinase OS=Streptococcus agalactiae serotype V GN=gmk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.540e-32
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V +GPSGVGKGT+   +       F +SVS TTR  R  E DGV Y F  R   E  IK+G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V++   D +FIF+ PP +EELEERL  RGT++ + I +R+  AKEEI   +    +D+ + ND++    E +K+++
Sbjct:    8 IVFSGPSGVGKGTVRQEIFSTPDHKFDYSVSMTTRPQRPGEVDGVDYFFRTREEFEALIKEGQMLEYAEYVGNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALMRE---YDYAVVNDQVSLAAERVKRVI 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRA3 (Guanylate kinase OS=Streptococcus agalactiae serotype III GN=gmk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.540e-32
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V +GPSGVGKGT+   +       F +SVS TTR  R  E DGV Y F  R   E  IK+G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V++   D +FIF+ PP +EELEERL  RGT++ + I +R+  AKEEI   +    +D+ + ND++    E +K+++
Sbjct:    8 IVFSGPSGVGKGTVRQEIFSTPDHKFDYSVSMTTRPQRPGEVDGVDYFFRTREEFEALIKEGQMLEYAEYVGNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALMRE---YDYAVVNDQVSLAAERVKRVI 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRA1 (Guanylate kinase OS=Streptococcus agalactiae serotype Ia GN=gmk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.540e-32
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V +GPSGVGKGT+   +       F +SVS TTR  R  E DGV Y F  R   E  IK+G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V++   D +FIF+ PP +EELEERL  RGT++ + I +R+  AKEEI   +    +D+ + ND++    E +K+++
Sbjct:    8 IVFSGPSGVGKGTVRQEIFSTPDHKFDYSVSMTTRPQRPGEVDGVDYFFRTREEFEALIKEGQMLEYAEYVGNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALMRE---YDYAVVNDQVSLAAERVKRVI 183          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_STAEQ5.118e-3338.55Guanylate kinase OS=Staphylococcus epidermidis (st... [more]
KGUA_PELCD8.730e-3340.86Guanylate kinase OS=Pelobacter carbinolicus (strai... [more]
VA57_VACCW1.140e-3238.17Guanylate kinase homolog OS=Vaccinia virus (strain... [more]
KGUA_VIBVY1.140e-3243.58Guanylate kinase OS=Vibrio vulnificus (strain YJ01... [more]
KGUA_VIBVU1.140e-3243.58Guanylate kinase OS=Vibrio vulnificus GN=gmk PE=3 ... [more]
KGUA_PROMT1.489e-3239.36Guanylate kinase OS=Prochlorococcus marinus (strai... [more]
KGUA_SYNP62.540e-3243.68Guanylate kinase OS=Synechococcus sp. (strain ATCC... [more]
KGUA_STRA52.540e-3241.90Guanylate kinase OS=Streptococcus agalactiae serot... [more]
KGUA_STRA32.540e-3241.90Guanylate kinase OS=Streptococcus agalactiae serot... [more]
KGUA_STRA12.540e-3241.90Guanylate kinase OS=Streptococcus agalactiae serot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
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