CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_DECAR (Guanylate kinase OS=Dechloromonas aromatica (strain RCB) GN=gmk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.540e-32
Identity = 78/182 (42.86%), Postives = 113/182 (62.09%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGLDG 594
            V+  PSG GK TL+ ML+++  S+   S+S+TTR PR  E++G  YHF E       I   +FLE+A VHGN YGTS + +     AG+  +L+ID QGA+ VRA    AI +FI PPSMEEL  RL  RGT++ D I +RL  A+ E+   +  G FD+++ ND+L +  ++L+ ++   G
Sbjct:    7 VVAAPSGAGKTTLVRMLLEQESSV-NLSISYTTRHPRPGEQNGREYHFVETPEFRAMIARQEFLEWAEVHGNFYGTSKKWIADQLAAGRDVLLEIDWQGAQQVRALFPQAIGVFILPPSMEELTRRLTGRGTDSPDVIDRRLAAAQAEM---RHVGEFDYVIINDQLAQALDDLRAVVRASG 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_VIBCH (Guanylate kinase OS=Vibrio cholerae GN=gmk PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSM-FGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +++ PSG GK +LI+ L+++ P+     SVSHTTR  R  E+DGVHYHF E+    + I  G+FLE+A V GN YGTS   +E   + G    LDID QGAR +R+   +A  IFI PPS EELE RL  RG +++  I KR+  AK EI        +D+++ ND  +    + K ++
Sbjct:    8 IVSAPSGAGKSSLIAALLEQNPTYAMKVSVSHTTRGMRPGEQDGVHYHFVEKEHFIELIGKGEFLEYAEVFGNYYGTSRVWIENTLNKGIDVFLDIDWQGARQIRSQMPEAKSIFILPPSKEELERRLNTRGQDSDAVIAKRMGEAKSEISHYSE---YDYVIINDDFDVALMDFKAII 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNE7 (Guanylate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=gmk PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 76/174 (43.68%), Postives = 107/174 (61.49%), Query Frame = 1
Query:   31 NVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLE 552
            ++ + VV+TGPSGVGKGTL+  ++ + P  F  S+S TTR+PR  E DG HY+F  R   +  I + +FLE+A   GNLYGT    V    + G+  IL+I+++GAR VR +   A  + + PPS+EELE R+R R TE E  I +RL  A+ EI   K    FD  + ND+L+
Sbjct:    2 SIGRVVVLTGPSGVGKGTLLKAILSQHPEAF-LSISATTRSPRPGEVDGQHYYFLSREEFQTKIAEQEFLEWAEFAGNLYGTPRSPVIEQVNLGRTVILEIELEGARQVRKTLPSARQVMLLPPSVEELERRIRERATEDEAAIARRLLQAQTEIGAAKE---FDRCVINDQLD 171          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_LACLA (Guanylate kinase OS=Lactococcus lactis subsp. lactis GN=gmk PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 76/179 (42.46%), Postives = 108/179 (60.34%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V +GPSGVGKGT+ + +  E  + F +SVS TTR  R  E DG  Y+F  R   E+ I++G+ LE+A   GN YGT +  V    D GK   L+I+VQGA  V+    D +F+F+ PP +EEL  RL  RGT++ + I  RL  AKEEI   +    +D+ + NDK+E   E +KK++
Sbjct:    8 IVFSGPSGVGKGTVRAKIF-ESENNFEYSVSMTTRKQRPGEVDGKDYYFRTRDEFEEMIRNGQMLEYAEYVGNYYGTPLTYVNQTLDEGKDVFLEIEVQGALQVKEKVPDGVFVFLTPPDLEELRGRLVGRGTDSAEVIASRLEKAKEEI---RLMSEYDYAVVNDKVELAAERVKKII 182          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_ALCBS (Guanylate kinase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gmk PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 76/178 (42.70%), Postives = 108/178 (60.67%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +I+ PSG GK +L++ L+ +   +   S+SHTTRA R  EKDGV+YHFT+R    + ++ G+FLE A V GNLYGTS + V      G   IL+ID QGA  +R    D++ IFI PPS+E L  RLR R T+ E  I +RL  A+EE+      G FD+++ ND  +     L+ ++
Sbjct:    9 IISAPSGAGKTSLVAALVDKLAQV-RISISHTTRAMRPGEKDGVNYHFTDRDCFVRQVEQGRFLEHAQVFGNLYGTSADWVAQTLRTGDDVILEIDWQGATQIRKQLPDSVSIFILPPSLEALAGRLRGRETDDETVIQQRLDGAQEEMSH---YGEFDYLVVNDDFQRALYELEAIV 182          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: VA57_VACCC (Guanylate kinase homolog OS=Vaccinia virus (strain Copenhagen) GN=A57R PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.333e-32
Identity = 71/186 (38.17%), Postives = 112/186 (60.22%), Query Frame = 1
Query:   25 IGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +  + K ++++GPSG GK T I+  + E+   FGF VSHTTR PR ME++GV YH+  R  + K I  G FLE     GN+YGTS  AV   A   + C++D+++ G RS + + L    ++I P S++ +E +LR R TE  D+I +R+  AK ++++   +G+FD I+  D +   Y  L ++L
Sbjct:    1 MSGIVKSIILSGPSGSGK-TAIAKRLWEY---FGFVVSHTTRFPRPMEREGVDYHYVNREAIWKGIAAGNFLEHTEFLGNIYGTSKTAVNTAAINNRICVMDLNIDGVRSFKNTYLMPYSVYIRPTSLKMVETKLRCRNTEANDEIHRRVILAKTDMDEANEAGLFDTIIIEDDVNLAYSKLIQIL 182          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_VIBF1 (Guanylate kinase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gmk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.333e-32
Identity = 79/196 (40.31%), Postives = 110/196 (56.12%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSM-FGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGLDGSIAATHQTSPKGI 633
            +++ PSG GK +LIS L++  P+     SVSHTTR  R  E DGVHYHF ++   E+ I+ G+FLE+A V GN YGTS   +E   D G    LDID QGAR +R     A  +FI PPS  ELE RL ARG +++  I KR+  AK EI        +D+++ ND  +    + + ++  +        T  KG+
Sbjct:    8 IVSAPSGAGKSSLISALLESNPTYAMKVSVSHTTRGMRPGETDGVHYHFIQKEHFEELIQKGEFLEYAEVFGNYYGTSRVWIEETLDKGIDVFLDIDWQGARQIREQMPLAKSVFILPPSNGELERRLNARGQDSDAVIAKRMSEAKSEISHYDE---YDYVIINDDFDTAQMDFRSIIRAERLKQDKQTTKYKGM 200          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRT2 (Guanylate kinase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=gmk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.333e-32
Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V +GPSGVGKGT+   +  +    F +SVS TTRA R  E DG  Y F  R   E+ I++G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V+    DA+FIF+ PP + ELEERL  RGT++E+ I +R+  A+EEI        +D+ + ND++    E +K+++
Sbjct:    8 IVFSGPSGVGKGTVRQEIFSKSDHKFEYSVSMTTRAQRPGEVDGKDYFFRSREEFEELIRNGQMLEYAEYVGNYYGTPLAYVNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLNELEERLVGRGTDSEEVIAQRIERAREEIALMSE---YDYTIVNDEVPLAAERVKRVI 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRT1 (Guanylate kinase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=gmk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.333e-32
Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V +GPSGVGKGT+   +  +    F +SVS TTRA R  E DG  Y F  R   E+ I++G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V+    DA+FIF+ PP + ELEERL  RGT++E+ I +R+  A+EEI        +D+ + ND++    E +K+++
Sbjct:    8 IVFSGPSGVGKGTVRQEIFSKSDHKFEYSVSMTTRAQRPGEVDGKDYFFRSREEFEELIRNGQMLEYAEYVGNYYGTPLAYVNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLNELEERLVGRGTDSEEVIAQRIERAREEIALMSE---YDYTIVNDEVPLAAERVKRVI 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STAHJ (Guanylate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gmk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32
Identity = 69/179 (38.55%), Postives = 114/179 (63.69%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   +  +  + + +SVS TTR  R  E DGV Y F  +   E  I++ +F+E+A   GN YGT V+ V+    AG    L+I+V+GA+ VR    DA+FIF+ PPS++ L+ERL  RGTE++++I  R+  A++E+E      ++D+++ ND++    E ++ ++
Sbjct:    9 IVLSGPSGVGKGTVRKEIFDDPTTSYKYSVSMTTRNMREGEVDGVDYFFKTKEEFEALIQEDQFIEYAEYVGNYYGTPVQYVKDTMAAGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLKERLVGRGTESDEKIQSRVNEARKEVEM---MNLYDYVVVNDEVHLAKERIQSIV 184          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_DECAR2.540e-3242.86Guanylate kinase OS=Dechloromonas aromatica (strai... [more]
KGUA_VIBCH3.317e-3242.46Guanylate kinase OS=Vibrio cholerae GN=gmk PE=3 SV... [more]
KGUA_SYNE73.317e-3243.68Guanylate kinase OS=Synechococcus elongatus (strai... [more]
KGUA_LACLA3.317e-3242.46Guanylate kinase OS=Lactococcus lactis subsp. lact... [more]
KGUA_ALCBS3.317e-3242.70Guanylate kinase OS=Alcanivorax borkumensis (strai... [more]
VA57_VACCC4.333e-3238.17Guanylate kinase homolog OS=Vaccinia virus (strain... [more]
KGUA_VIBF14.333e-3240.31Guanylate kinase OS=Vibrio fischeri (strain ATCC 7... [more]
KGUA_STRT24.333e-3241.34Guanylate kinase OS=Streptococcus thermophilus (st... [more]
KGUA_STRT14.333e-3241.34Guanylate kinase OS=Streptococcus thermophilus (st... [more]
KGUA_STAHJ5.659e-3238.55Guanylate kinase OS=Staphylococcus haemolyticus (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
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