CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_MYCTU (Guanylate kinase OS=Mycobacterium tuberculosis GN=gmk PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32
Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 1
Query:   16 KGVIGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLY--GTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +G    V + VV++GPS VGK T++  L +  P++  FSVS TTRAPR  E DGV YHF + +  ++ I  G+ LE+A +HG L+  GT  + V A A  G   ++++D+ GAR+++ +  +A+ +F+ PPS ++L+ RL  RGTET D I +RL  A+ E+    + G FD ++ N +LE     L  LL
Sbjct:   14 RGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLH-FSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIEL---AAQGDFDKVVVNRRLESACAELVSLL 200          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_MYCBO (Guanylate kinase OS=Mycobacterium bovis GN=gmk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32
Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 1
Query:   16 KGVIGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLY--GTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +G    V + VV++GPS VGK T++  L +  P++  FSVS TTRAPR  E DGV YHF + +  ++ I  G+ LE+A +HG L+  GT  + V A A  G   ++++D+ GAR+++ +  +A+ +F+ PPS ++L+ RL  RGTET D I +RL  A+ E+    + G FD ++ N +LE     L  LL
Sbjct:   14 RGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLH-FSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIEL---AAQGDFDKVVVNRRLESACAELVSLL 200          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CLOD6 (Guanylate kinase OS=Clostridium difficile (strain 630) GN=gmk PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32
Identity = 70/179 (39.11%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSG GKGT+   L+KE  ++   SVS TTR PR  E DGV+Y F  +   E+ I+ G+FLE+A ++ N YGT   A+    + G+  +L+I++QGA+ ++    + +FIF+ PPS+EEL+ R+  RGTETE +I KR   A EEI+  K    +D+ ++N+ ++   + ++ ++
Sbjct:    9 LVVSGPSGAGKGTICKELLKENDTI-KLSVSATTRKPRTGEVDGVNYFFISKEKFEEMIEKGEFLEYAQIYDNFYGTPKAAIMECLEKGQDVLLEIEMQGAKQIKEVCPEGVFIFVLPPSLEELKNRIVGRGTETEAEIEKRFSCAYEEIKMIKD---YDYFIFNEDVKTSAKEIEGII 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRR6 (Guanylate kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=gmk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLK 573
            +V +GPSGVGKGT+   + +   + F +SVS TTRA R  E DGV Y F  R   E+ I+ G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V+    DA+FIF+ PP ++EL++RL  RGT++ + I +R+  AKEEI   +    +D+ + ND++    E +K
Sbjct:    8 IVFSGPSGVGKGTVRREIFESSENQFQYSVSMTTRAQRPGEVDGVDYFFRTREEFEELIRQGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLDELQDRLVGRGTDSAEVIAQRIEKAKEEIALMRE---YDYAIVNDQVSLAAERVK 180          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_RUBXD (Guanylate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gmk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32
Identity = 76/179 (42.46%), Postives = 106/179 (59.22%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSG GK TLI   +   P +  +SVS TTRAPR  E +G  Y F  R   E+ I++G+FLE+A   GNLYGT    VE   ++G   IL+I++QGAR VR    DA+ IF+  PS+EE   RL  R TE+ED + +RL  A EE+    +   FD  + ND  E   E + +++
Sbjct:    7 IVVSGPSGAGKSTLIRAALDAVPQL-AYSVSATTRAPRPGEVNGRDYIFLSREEFERWIREGRFLEWAEYSGNLYGTPAHRVEEYLESGLSVILEIELQGARKVRRKRPDAVMIFVRAPSLEETRRRLEGRATESEDAVQRRLATAVEEV---AARDEFDCEVVNDDYERAREEMIEIM 181          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRPN (Guanylate kinase OS=Streptococcus pneumoniae GN=gmk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLK 573
            +V +GPSGVGKGT+   + +   + F +SVS TTRA R  E DGV Y F  R   E+ I+ G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V+    DA+FIF+ PP ++EL++RL  RGT++ + I +R+  AKEEI   +    +D+ + ND++    E +K
Sbjct:    8 IVFSGPSGVGKGTVRREIFESSENQFQYSVSMTTRAQRPGEVDGVDYFFRTREEFEELIRQGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLDELQDRLVGRGTDSAEVIAQRIEKAKEEIALMRE---YDYAIVNDQVPLAAERVK 180          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SHEDO (Guanylate kinase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gmk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31
Identity = 79/202 (39.11%), Postives = 108/202 (53.47%), Query Frame = 1
Query:   49 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGLDGSIAAT--HQTSPKGIDLPAD 648
            +++ PSG GK +LI+ L+K+ P     SVSHTTRAPR  E DG HYHF      +  I +  F E A V GN YGTS + +E     G    LDID QGA+ V+    +AI +FI PPS  ELE RL  RG ++ D I  R+  A  E+        +D ++ ND  E+   +LK ++       A+  H  +   +DL AD
Sbjct:    9 IVSAPSGAGKSSLITALLKDKPQDMQVSVSHTTRAPRPGEVDGQHYHFVSVEQFKALIAENAFFESAEVFGNFYGTSRQVIENTLSLGIDVFLDIDWQGAQQVKKIMPEAIGVFILPPSKAELERRLTGRGQDSSDVIAARMAQAVSEMSHYNE---YDFVIINDDFEQALADLKSIIFSQRLTCASQFHTHNDMLVDLLAD 207          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_IDILO (Guanylate kinase OS=Idiomarina loihiensis GN=gmk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31
Identity = 79/188 (42.02%), Postives = 110/188 (58.51%), Query Frame = 1
Query:   22 VIGNVEKPVVITGPSGVGKGTLISMLMKEFPSM-FGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            V+GN+    +I  PSG GK +LI  L+++ P      SVS TTRAPR  E  GVHYHF      E+ I  G+F E+A V GN YGTS + VE++   GK   LDID QGA+ VR    +   +FI PPS+E LEERLR RG ++++ I +R+  A+ E+        FD++L ND       +L+ ++
Sbjct:    6 VLGNL---FIIAAPSGAGKSSLIRALLEKHPDQSMQVSVSSTTRAPRPGEVQGVHYHFLSTEEFEQRIDAGEFYEWARVFGNYYGTSRKVVESLLAEGKDVFLDIDWQGAQQVREHHPEVRSVFIVPPSLEILEERLRVRGQDSDEVIAERMAKAQAEMSHYHE---FDYLLVNDDFNNSLASLEHIV 187          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_CLOAB (Guanylate kinase OS=Clostridium acetobutylicum GN=gmk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +VI+GPSG GKGT+   LMKE    F  SVS TTR PR  E +G  Y+F      +  I +  FLE+A V+GN YGT  ++V    D G+  IL+ID+QGA  V+ +  + +FIFI PPSMEEL++R+  RG+ETE  ++ R ++A +EI        +++ + ND +E     +  ++
Sbjct:    8 IVISGPSGAGKGTICKALMKE--QQFWLSVSATTREPREKEVEGKSYYFLTVDEFKSKISEDGFLEYAEVYGNYYGTPKKSVCEKIDNGENVILEIDIQGALKVKENYPEGVFIFILPPSMEELKKRIIGRGSETEKSLMTRFKSAYKEINYVSK---YNYAIINDTVENAVTKINSII 181          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_STRPM (Guanylate kinase OS=Streptococcus pyogenes serotype M28 GN=gmk PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.646e-31
Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V +GPSGVGKGT+   +       F +SVS TTR  R  E DGV Y F  R   E+ IK G+ LE+A   GN YGT +  V    D G    L+I+VQGA  V++   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+++
Sbjct:    8 IVFSGPSGVGKGTVRQEIFSTPDHKFEYSVSMTTRPQRPGEVDGVDYFFRTREEFEELIKTGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_MYCTU5.659e-3239.79Guanylate kinase OS=Mycobacterium tuberculosis GN=... [more]
KGUA_MYCBO5.659e-3239.79Guanylate kinase OS=Mycobacterium bovis GN=gmk PE=... [more]
KGUA_CLOD67.390e-3239.11Guanylate kinase OS=Clostridium difficile (strain ... [more]
KGUA_STRR69.652e-3241.48Guanylate kinase OS=Streptococcus pneumoniae (stra... [more]
KGUA_RUBXD9.652e-3242.46Guanylate kinase OS=Rubrobacter xylanophilus (stra... [more]
KGUA_STRPN1.261e-3141.48Guanylate kinase OS=Streptococcus pneumoniae GN=gm... [more]
KGUA_SHEDO1.261e-3139.11Guanylate kinase OS=Shewanella denitrificans (stra... [more]
KGUA_IDILO1.261e-3142.02Guanylate kinase OS=Idiomarina loihiensis GN=gmk P... [more]
KGUA_CLOAB1.261e-3140.78Guanylate kinase OS=Clostridium acetobutylicum GN=... [more]
KGUA_STRPM1.646e-3140.22Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
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